Strain Fitness in Escherichia coli BW25113 around b1232

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
1,286,125	+				+0.8
1,286,316	-				-1.9
1,286,316	-				+0.3
1,286,690	-				+0.2
1,286,690	-				+1.3
1,286,805	+	tyrT	b1231	0.52	+0.9
1,286,916	+				+1.7
1,287,056	+				-3.0
1,287,064	+				+0.2
1,287,233	+	purU	b1232	0.27	-0.0
1,287,255	-	purU	b1232	0.30	+0.0
1,287,255	-	purU	b1232	0.30	+1.2
1,287,342	+	purU	b1232	0.40	-3.5
1,287,375	+	purU	b1232	0.44	-1.1
1,287,423	-	purU	b1232	0.50	-1.0
1,287,425	+	purU	b1232	0.50	+1.6
1,287,439	+	purU	b1232	0.51	+0.2
1,287,448	+	purU	b1232	0.53	+0.6
1,287,473	-	purU	b1232	0.56	-0.2
1,287,491	+	purU	b1232	0.58	-0.2
1,287,647	-	purU	b1232	0.76	+0.4
1,287,691	-	purU	b1232	0.81	+1.1
1,287,714	+	purU	b1232	0.84	-1.5
1,287,801	-				+1.5
1,287,801	-				+0.3
1,287,837	+				-3.5
1,287,886	+				+0.9
1,287,886	+				+1.4
1,287,948	-	ychJ	b1233	0.11	+1.7
1,287,948	-	ychJ	b1233	0.11	+0.7
1,288,051	+	ychJ	b1233	0.34	-3.1
1,288,133	-	ychJ	b1233	0.51	+1.6
1,288,262	+	ychJ	b1233	0.80	-0.6
1,288,263	+	ychJ	b1233	0.80	-0.1
1,288,263	+	ychJ	b1233	0.80	+1.1
1,288,299	+				-1.7
1,288,321	-				+0.6
1,288,405	-				+1.3
1,288,405	-				-2.7
1,288,405	-				+1.8
1,288,407	+				-1.3
1,288,410	-				-0.1
1,288,410	-				+0.9
1,288,439	-				+0.8
1,288,509	+				+1.6
1,288,510	+				-0.3
1,288,510	+				-1.6
1,288,514	+				+0.6
1,288,599	+	rssA	b1234	0.14	-0.7
1,288,690	+	rssA	b1234	0.25	+0.9
1,288,690	+	rssA	b1234	0.25	+3.0
1,288,713	+	rssA	b1234	0.27	+0.6