Strain Fitness in Escherichia coli BW25113 around b1110

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
1,165,904	+	ndh	b1109	0.46	-2.4
1,165,904	+	ndh	b1109	0.46	-1.7
1,166,067	-	ndh	b1109	0.58	-2.3
1,166,072	-	ndh	b1109	0.59	-0.3
1,166,095	+	ndh	b1109	0.60	-0.4
1,166,219	-	ndh	b1109	0.70	-2.1
1,166,244	+	ndh	b1109	0.72	-2.3
1,166,244	+	ndh	b1109	0.72	+0.7
1,166,257	+	ndh	b1109	0.73	-2.0
1,166,257	+	ndh	b1109	0.73	-2.8
1,166,333	+	ndh	b1109	0.79	-1.9
1,166,478	-	ndh	b1109	0.90	-1.2
1,166,501	-				+0.3
1,166,526	+				-2.1
1,166,573	-				-0.3
1,166,623	-				+0.1
1,166,655	+				-0.5
1,166,661	-				-1.2
1,166,824	+				+0.8
1,166,972	+	ycfJ	b1110	0.28	-2.9
1,166,972	+	ycfJ	b1110	0.28	-0.8
1,166,972	+	ycfJ	b1110	0.28	+2.1
1,166,972	+	ycfJ	b1110	0.28	-0.5
1,166,980	+	ycfJ	b1110	0.29	+0.6
1,167,051	+	ycfJ	b1110	0.42	-0.5
1,167,051	+	ycfJ	b1110	0.42	+0.7
1,167,125	+	ycfJ	b1110	0.56	-0.2
1,167,132	+	ycfJ	b1110	0.57	-3.0
1,167,132	+	ycfJ	b1110	0.57	+1.2
1,167,243	+	ycfJ	b1110	0.78	+0.4
1,167,243	+	ycfJ	b1110	0.78	-2.8
1,167,243	+	ycfJ	b1110	0.78	-1.3
1,167,251	-	ycfJ	b1110	0.79	+0.9
1,167,263	-	ycfJ	b1110	0.82	+1.2
1,167,263	-	ycfJ	b1110	0.82	-1.2
1,167,362	-				+0.7
1,167,364	+				-2.5
1,167,364	+				-1.7
1,167,640	+	ycfQ	b1111	0.34	-2.7
1,167,840	+	ycfQ	b1111	0.66	+0.5
1,167,840	-	ycfQ	b1111	0.66	-0.6
1,167,949	-	ycfQ	b1111	0.83	-1.7
1,168,045	-				-1.0
1,168,045	-				-2.3
1,168,075	-				-0.3
1,168,075	-				+0.1