Strain Fitness in Escherichia coli BW25113 around b1108

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
1,163,576	+	nagZ	b1107	0.25	-0.3
1,163,576	+	nagZ	b1107	0.25	-1.2
1,163,630	-	nagZ	b1107	0.30	-1.0
1,163,687	+	nagZ	b1107	0.36	+0.6
1,163,695	-	nagZ	b1107	0.37	-1.7
1,163,695	-	nagZ	b1107	0.37	+1.2
1,163,772	+	nagZ	b1107	0.44	-0.2
1,163,819	-	nagZ	b1107	0.49	-1.5
1,163,831	-	nagZ	b1107	0.50	+0.4
1,163,831	-	nagZ	b1107	0.50	-0.0
1,163,855	-	nagZ	b1107	0.52	-0.8
1,163,949	-	nagZ	b1107	0.62	-2.0
1,163,949	-	nagZ	b1107	0.62	-2.8
1,164,356	-				-2.9
1,164,707	-	ycfP	b1108	0.63	-0.1
1,164,715	-	ycfP	b1108	0.64	+0.8
1,164,715	-	ycfP	b1108	0.64	-1.5
1,164,925	+				-1.2
1,164,925	+				+2.0
1,164,943	+				+0.2
1,165,028	-				+1.0
1,165,028	-				-0.2
1,165,364	-				-1.9
1,165,364	-				+0.2
1,165,374	-				-1.0
1,165,602	-	ndh	b1109	0.23	-1.5
1,165,602	-	ndh	b1109	0.23	-1.8
1,165,673	+	ndh	b1109	0.28	-2.5
1,165,904	+	ndh	b1109	0.46	-2.4
1,165,904	+	ndh	b1109	0.46	-1.7