Strain Fitness in Escherichia coli BW25113 around b0981

Experiment: Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB
1,040,254	+	appA	b0980	0.32	-3.8
1,040,348	-	appA	b0980	0.39	+0.0
1,040,782	-	appA	b0980	0.73	-0.3
1,040,797	-	appA	b0980	0.74	+0.3
1,040,816	+	appA	b0980	0.75	-1.0
1,040,816	+	appA	b0980	0.75	+1.2
1,040,822	-	appA	b0980	0.76	-1.0
1,040,822	-	appA	b0980	0.76	-0.9
1,040,874	+	appA	b0980	0.80	+0.6
1,040,894	+	appA	b0980	0.81	-2.4
1,040,894	+	appA	b0980	0.81	-3.0
1,041,148	-				-0.3
1,041,148	-				-0.1
1,041,171	+				+0.4
1,041,197	-				-3.7
1,041,197	-				+1.5
1,041,272	+				-0.2
1,041,286	-				-2.4
1,041,331	+				+1.3
1,041,331	+				+1.1
1,041,339	-				+0.4
1,041,360	-				-0.4
1,041,366	+				+0.5
1,041,419	-				-1.0
1,041,554	+	yccC	b0981	0.14	-1.6
1,041,554	+	yccC	b0981	0.14	+0.9
1,041,573	+	yccC	b0981	0.15	+1.4
1,041,573	+	yccC	b0981	0.15	-0.5
1,041,695	+	yccC	b0981	0.20	+1.0
1,042,035	-	yccC	b0981	0.36	-2.1
1,042,035	-	yccC	b0981	0.36	+0.8
1,042,053	+	yccC	b0981	0.37	+2.6
1,042,180	+	yccC	b0981	0.43	+1.3
1,042,180	+	yccC	b0981	0.43	+0.4
1,042,202	-	yccC	b0981	0.44	-3.8
1,042,202	-	yccC	b0981	0.44	+0.8
1,042,283	+	yccC	b0981	0.47	+0.5
1,042,582	+	yccC	b0981	0.61	-2.9
1,042,582	+	yccC	b0981	0.61	+0.2
1,042,607	-	yccC	b0981	0.62	+0.3
1,042,704	+	yccC	b0981	0.67	+1.3
1,042,704	+	yccC	b0981	0.67	+1.2
1,042,988	+	yccC	b0981	0.80	-0.4
1,043,081	+	yccC	b0981	0.84	+1.4
1,043,081	+	yccC	b0981	0.84	+0.5
1,043,099	+	yccC	b0981	0.85	-0.2
1,043,278	+				-3.5
1,043,278	+				+0.1
1,043,345	-				-0.5
1,043,345	-				+0.4
1,043,391	+				+0.7
1,043,500	-	yccY	b0982	0.11	+1.5
1,043,530	-	yccY	b0982	0.17	+0.2
1,043,635	-	yccY	b0982	0.41	+0.2
1,043,686	+	yccY	b0982	0.52	-0.3
1,043,710	+	yccY	b0982	0.57	+0.6
1,043,710	+	yccY	b0982	0.57	+1.1
1,043,812	-	yccY	b0982	0.80	+1.2
1,043,829	-	yccY	b0982	0.84	-0.2
1,043,918	+				+1.2
1,043,918	+				-1.9
1,043,929	+				-2.2
1,043,929	+				+0.2
1,043,958	+				-1.0
1,044,203	-	yccZ	b0983	0.28	-1.6
1,044,397	-	yccZ	b0983	0.45	+0.3
1,044,397	-	yccZ	b0983	0.45	+0.4