Strain Fitness in Pseudomonas putida KT2440 around PP_2710

Experiment: D-Glucose (C) pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 6
3,099,819	+		PP_2709	0.41	-0.7
3,100,251	+		PP_2709	0.70	-0.6
3,100,300	+		PP_2709	0.73	-1.0
3,100,323	+		PP_2709	0.75	-2.4
3,100,323	+		PP_2709	0.75	+0.0
3,100,324	-		PP_2709	0.75	-1.0
3,100,324	-		PP_2709	0.75	-0.5
3,100,396	+		PP_2709	0.80	-0.3
3,100,396	+		PP_2709	0.80	-0.5
3,100,396	+		PP_2709	0.80	+0.2
3,100,397	-		PP_2709	0.80	-2.9
3,100,525	+		PP_2709	0.89	-1.1
3,100,595	+				-2.4
3,100,595	+				+0.7
3,100,808	+		PP_2710	0.16	-1.0
3,100,808	+		PP_2710	0.16	-1.0
3,100,809	-		PP_2710	0.16	-2.6
3,100,832	+		PP_2710	0.19	-0.8
3,100,833	-		PP_2710	0.20	+1.7
3,100,925	+		PP_2710	0.33	-0.1
3,100,925	+		PP_2710	0.33	-0.8
3,100,926	-		PP_2710	0.33	-1.4
3,100,941	-		PP_2710	0.35	-2.2
3,100,941	-		PP_2710	0.35	-0.9
3,101,045	+		PP_2710	0.51	-0.4
3,101,189	+		PP_2710	0.72	-2.8
3,101,234	+		PP_2710	0.78	-0.1
3,101,235	-		PP_2710	0.79	+0.7
3,101,417	-				-0.2
3,101,417	-				-1.0
3,101,417	-				+0.5
3,101,480	+		PP_2711	0.14	-0.0
3,101,664	+		PP_2711	0.37	-0.6
3,101,665	-		PP_2711	0.37	-0.4
3,101,680	+		PP_2711	0.39	+2.7
3,101,680	+		PP_2711	0.39	-1.4
3,101,680	+		PP_2711	0.39	+0.0
3,101,681	-		PP_2711	0.39	+0.4
3,101,781	+		PP_2711	0.51	-0.7
3,101,896	-		PP_2711	0.66	-1.4
3,101,972	+		PP_2711	0.75	-0.6
3,102,040	-		PP_2711	0.83	-1.2
3,102,072	-		PP_2711	0.87	-0.9
3,102,138	+				-0.4
3,102,139	-				+0.4
3,102,141	-				-0.5
3,102,284	+		PP_2712	0.18	-0.2