Strain Fitness in Pseudomonas putida KT2440 around PP_1050

Experiment: D-Glucose (C) pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) pH 6
1,200,359	+				-0.1
1,200,360	-				+0.8
1,200,360	-				+0.2
1,200,360	-				+0.3
1,200,428	+		PP_1049	0.18	-0.3
1,200,428	+		PP_1049	0.18	-0.2
1,200,543	+		PP_1049	0.43	-0.1
1,200,543	+		PP_1049	0.43	+0.2
1,200,544	-				+2.1
1,200,544	-		PP_1049	0.44	+0.1
1,200,544	-		PP_1049	0.44	+1.6
1,200,544	-		PP_1049	0.44	-0.4
1,200,648	+		PP_1049	0.66	+0.1
1,200,649	-		PP_1049	0.67	-0.9
1,200,688	-		PP_1049	0.75	+0.5
1,200,688	-		PP_1049	0.75	+1.5
1,200,730	-		PP_1049	0.84	-0.2
1,200,798	+				-1.9
1,200,799	-				-0.9
1,201,157	+		PP_1050	0.82	+1.1
1,201,275	+		PP_1051	0.20	+0.8
1,201,320	+		PP_1051	0.31	-0.1
1,201,321	-		PP_1051	0.31	-0.5
1,201,418	+		PP_1051	0.55	-0.0
1,201,419	-		PP_1051	0.55	-0.5
1,201,574	+				+0.3
1,201,575	-				-1.0
1,201,575	-				+0.5
1,201,575	-				-0.6
1,201,575	-				-2.4
1,201,984	+		PP_1052	0.65	+1.3
1,202,149	+				-0.7
1,202,149	+				+1.4
1,202,149	+				+0.6
1,202,150	-				+2.1
1,202,150	-				+0.2
1,202,208	-				+0.5