Strain Fitness in Pseudomonas putida KT2440 around PP_0809

Experiment: MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL
948,220	+		PP_0808	0.59	+0.9
948,221	-		PP_0808	0.59	+0.1
948,221	-		PP_0808	0.59	+0.2
948,249	+		PP_0808	0.61	-0.2
948,481	+		PP_0808	0.81	-0.9
948,481	+		PP_0808	0.81	-0.8
948,481	+		PP_0808	0.81	+0.0
948,481	+		PP_0808	0.81	-0.9
948,481	+		PP_0808	0.81	+0.1
948,481	+		PP_0808	0.81	+1.0
948,482	-		PP_0808	0.81	-1.7
948,482	-		PP_0808	0.81	+0.8
948,482	-		PP_0808	0.81	+1.4
948,482	-		PP_0808	0.81	-0.1
948,482	-		PP_0808	0.81	+0.1
948,482	-		PP_0808	0.81	+0.3
948,482	-		PP_0808	0.81	-0.1
948,488	-		PP_0808	0.82	+0.4
948,488	-		PP_0808	0.82	-0.2
948,488	-		PP_0808	0.82	+0.2
948,488	-		PP_0808	0.82	-0.5
948,586	+				-2.2
948,586	+				-0.1
948,587	-				-1.1
948,587	-				+0.7
948,587	-				-0.8
948,705	+				-0.3
948,705	+				-0.7
948,705	+				-0.0
948,706	-				-0.5
948,706	-				-0.1
948,750	+				+1.8
948,750	+				-0.0
948,751	-				+0.1
948,751	-				+0.1
948,785	-				+0.2
948,796	+				+0.3
948,814	+				-0.3
948,815	-				+1.2
948,822	+				-0.7
948,822	+				-1.1
948,822	+				+0.3
948,823	-				-0.1
948,823	-				+0.2
948,823	-				+0.2
948,823	-				-0.2
948,823	-				+1.5
948,824	+				-0.2
948,825	-				+0.3
948,825	-				-0.2
948,825	-				-0.8
948,863	+				-0.2
948,863	+				-0.5
948,863	+				-1.0
948,863	+				-1.3
948,863	+				+0.3
948,864	-				-1.5
948,864	-				-0.2
948,865	+				-0.9
948,865	+				+1.0
948,865	+				-1.0
948,865	+				+1.0
948,866	-				+0.7
948,866	-				-0.2
948,866	-				-1.0
948,866	-				+0.2
948,866	-				+0.2
948,867	+				+2.2
948,867	+				+0.0
948,867	+				-0.3
948,867	+				+0.2
948,867	+				+0.3
948,867	+				+0.6
948,867	+				-1.6
948,868	-				-0.3
948,868	-				+1.7
948,868	-				-0.5
948,868	-				-0.4
948,868	-				-2.2
948,868	-				+1.3
948,868	-				+0.6
948,868	-				-0.7
948,868	-				-0.2
948,869	+				-1.6
948,869	+				-0.1
948,870	-				-0.3
948,907	+				-0.2
948,907	+				-0.0
948,908	-				-1.1
948,908	-				-1.3
948,918	+				+0.8
949,102	+				+0.5
949,102	+				+0.1
949,139	-				+1.4
949,249	+		PP_0809	0.18	-1.8
949,249	+		PP_0809	0.18	-2.3
949,250	-		PP_0809	0.18	-1.9
949,250	-		PP_0809	0.18	-1.5
949,250	-		PP_0809	0.18	-2.3
949,303	+		PP_0809	0.28	-1.9
949,435	+		PP_0809	0.54	-1.3
949,435	+		PP_0809	0.54	-2.8
949,435	+		PP_0809	0.54	-1.6
949,435	+		PP_0809	0.54	-0.8
949,435	+		PP_0809	0.54	-4.0
949,435	+		PP_0809	0.54	-4.2
949,435	+		PP_0809	0.54	-2.2
949,435	+		PP_0809	0.54	-2.5
949,435	+		PP_0809	0.54	-3.9
949,435	+		PP_0809	0.54	-2.2
949,436	-		PP_0809	0.55	-3.2
949,436	-		PP_0809	0.55	-2.9
949,436	-		PP_0809	0.55	-2.6
949,436	-		PP_0809	0.55	-2.8
949,436	-		PP_0809	0.55	-3.4
949,437	+		PP_0809	0.55	-1.3
949,437	+		PP_0809	0.55	-2.1
949,437	+		PP_0809	0.55	-0.2
949,437	+		PP_0809	0.55	-2.3
949,438	-		PP_0809	0.55	-1.8
949,438	-		PP_0809	0.55	-0.8
949,438	-		PP_0809	0.55	-0.6
949,438	-		PP_0809	0.55	-0.9
949,438	-		PP_0809	0.55	-2.7
949,438	-		PP_0809	0.55	-4.5
949,439	+		PP_0809	0.55	-1.2
949,439	+		PP_0809	0.55	-3.1
949,439	+		PP_0809	0.55	-2.6
949,439	+		PP_0809	0.55	-4.2
949,440	-		PP_0809	0.55	-0.3
949,440	-		PP_0809	0.55	-2.3
949,440	-		PP_0809	0.55	-3.3
949,642	+				+0.1
949,642	+				+1.2
949,642	+				+0.4
949,643	-				-0.3
949,643	-				-0.4
949,663	+				-0.5
949,663	+				+0.2
949,664	-				-0.1
949,778	+				+1.0
949,778	+				+0.9
949,778	+				-1.0
949,827	-				-0.9
949,891	+				+0.2
949,891	+				+2.2
950,050	+				-0.3
950,050	+				+0.2
950,050	+				+2.0
950,075	+				+0.7
950,075	+				+0.7
950,075	+				-1.6