Strain Fitness in Pseudomonas putida KT2440 around PP_0293

Experiment: MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL
351,396	-		PP_0291	0.65	-0.3
351,396	-		PP_0291	0.65	-5.8
351,398	+		PP_0291	0.66	-1.7
351,398	+		PP_0291	0.66	-0.1
351,399	-		PP_0291	0.66	-1.3
351,399	-		PP_0291	0.66	-2.6
351,399	-		PP_0291	0.66	+2.5
351,399	-		PP_0291	0.66	-0.7
351,499	+				-5.4
351,499	+				-6.4
351,523	+				-3.0
351,524	-				-3.1
351,590	-		PP_0292	0.10	-0.1
351,791	+		PP_0292	0.37	-0.7
351,792	-		PP_0292	0.38	-0.1
351,792	-		PP_0292	0.38	-0.5
351,792	-		PP_0292	0.38	-6.6
351,812	+				+2.5
351,813	-		PP_0292	0.40	-1.3
351,813	-		PP_0292	0.40	-1.7
352,193	+				-3.6
352,193	+				-0.7
352,194	-				-0.9
352,194	-				-0.4
352,194	-				-2.6
352,194	-				-3.8
352,241	+				-0.2
352,242	-				-3.3
352,242	-				-3.9
352,242	-				+0.5
352,242	-				-3.1
352,242	-				-5.6
352,242	-				-3.3
352,457	+		PP_0293	0.25	-3.5
352,457	+		PP_0293	0.25	-4.7
352,457	+		PP_0293	0.25	-2.7
352,977	+				-0.8
352,977	+				-2.8
352,978	-				-0.8
353,001	+				-4.6
353,002	-				-1.8
353,002	-				-2.3
353,427	-		PP_0294	0.23	-0.8
353,519	+		PP_0294	0.31	-0.2
353,542	+		PP_0294	0.33	+0.9
353,542	+		PP_0294	0.33	+0.0
353,543	-		PP_0294	0.33	+2.2
353,543	-		PP_0294	0.33	+1.2
353,618	+		PP_0294	0.40	-1.1
353,618	+		PP_0294	0.40	-0.4