Strain Fitness in Pseudomonas putida KT2440 around PP_4697

Experiment: MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL
5,337,847	+		PP_4696	0.90	-2.8
5,337,917	+				-1.7
5,337,981	+				-2.2
5,337,982	-				-1.5
5,338,000	+				+0.0
5,338,000	+				-1.7
5,338,001	-				-0.4
5,338,001	-				+0.7
5,338,001	-				-1.0
5,338,167	+				-0.0
5,338,600	+				+0.3
5,338,601	-				-0.7
5,338,630	+				-0.8
5,338,631	-				+0.4
5,338,631	-				-1.3
5,338,651	-				+0.7
5,338,681	+				-1.1
5,338,704	+				-0.8
5,338,704	+				+0.5
5,338,705	-				-0.4
5,338,705	-				+1.1
5,338,736	+				-0.3
5,339,262	+		PP_4697	0.35	+3.0
5,339,265	+		PP_4697	0.36	-0.0
5,339,265	+		PP_4697	0.36	-1.7
5,339,265	+		PP_4697	0.36	+0.5
5,339,265	+		PP_4697	0.36	+0.0
5,339,439	+		PP_4697	0.48	+0.2
5,339,439	+		PP_4697	0.48	-0.4
5,339,439	+		PP_4697	0.48	-1.0
5,339,952	+		PP_4697	0.85	-0.5
5,340,167	+				-0.7
5,340,167	+				-0.3
5,340,629	+				-0.5
5,340,629	+				+0.6
5,340,630	-				+0.1
5,340,674	-				+0.0
5,340,674	-				-0.1
5,340,674	-				-2.5
5,340,687	+				-1.2
5,340,735	+				+0.0
5,340,735	+				-0.5
5,340,735	+				+1.2
5,340,735	+				+0.4
5,340,737	+				+0.5
5,340,737	+				-0.3
5,340,738	-				-0.5
5,340,738	-				-0.5
5,340,738	-				+0.5
5,340,738	-				-1.4
5,340,738	-				-1.4
5,340,769	-				-2.0
5,340,769	-				-0.3
5,340,840	+				+0.1
5,340,841	-				-1.3
5,340,841	-				-0.7
5,340,841	-				-1.3
5,340,841	-				-1.4
5,340,841	-				-1.4
5,340,891	+				-2.1
5,340,891	+				-0.4
5,340,892	-				-3.2
5,340,904	+				-0.4
5,340,905	-				-3.0
5,340,911	+				+0.5
5,340,911	+				+0.0
5,340,911	+				-1.9
5,340,912	-				-2.8
5,340,966	+				-0.8
5,340,966	+				-1.3
5,340,966	+				-1.5
5,340,966	+				-0.4
5,341,092	+		PP_4699	0.25	-2.1
5,341,093	-		PP_4699	0.25	-1.8