Strain Fitness in Pseudomonas putida KT2440 around PP_3817

Experiment: MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL
4,342,212	+				-0.2
4,342,235	+				+0.2
4,342,235	+				-1.3
4,342,235	+				+0.7
4,342,236	-				+0.9
4,342,241	+				-0.1
4,342,242	-				-0.6
4,342,283	+				+1.0
4,342,283	+				+0.2
4,342,331	-				+0.3
4,342,340	+				-0.6
4,342,340	+				-0.2
4,342,341	-				+1.0
4,342,461	-		PP_3816	0.21	-0.3
4,342,461	-		PP_3816	0.21	+0.2
4,342,610	+		PP_3816	0.39	-1.3
4,342,610	+		PP_3816	0.39	+0.3
4,342,611	-		PP_3816	0.39	+0.1
4,342,611	-		PP_3816	0.39	+1.0
4,342,621	+		PP_3816	0.41	+0.0
4,342,622	-		PP_3816	0.41	+0.1
4,342,622	-		PP_3816	0.41	+0.8
4,342,667	+		PP_3816	0.46	-0.1
4,342,667	+		PP_3816	0.46	+0.7
4,342,667	+		PP_3816	0.46	-1.3
4,342,667	+		PP_3816	0.46	-1.1
4,342,667	+		PP_3816	0.46	+0.9
4,342,667	+		PP_3816	0.46	+0.1
4,342,668	-		PP_3816	0.46	+0.5
4,342,668	-		PP_3816	0.46	+0.5
4,342,668	-		PP_3816	0.46	-2.0
4,342,668	-		PP_3816	0.46	-1.3
4,342,668	-		PP_3816	0.46	+0.1
4,342,686	+		PP_3816	0.49	-0.2
4,342,686	+				+0.7
4,342,686	+		PP_3816	0.49	-0.1
4,342,687	-		PP_3816	0.49	+0.1
4,342,687	-		PP_3816	0.49	-0.6
4,342,691	+		PP_3816	0.49	-0.9
4,342,692	-		PP_3816	0.49	-0.1
4,343,113	+				+0.5
4,343,191	-				-0.4
4,343,191	-				-0.3
4,343,602	-		PP_3817	0.42	-1.5
4,343,718	+		PP_3817	0.52	-1.2
4,343,718	+		PP_3817	0.52	-0.1
4,343,718	+		PP_3817	0.52	-2.2
4,343,718	+		PP_3817	0.52	-0.5
4,343,719	-		PP_3817	0.52	+0.1
4,343,719	-		PP_3817	0.52	+0.4
4,343,719	-		PP_3817	0.52	-1.2
4,343,817	+		PP_3817	0.61	+0.2
4,344,219	+				+0.5
4,344,220	-				-0.9
4,344,279	-				-0.4
4,344,342	+				+0.7
4,344,342	+				+0.0
4,344,342	+				+0.4
4,344,353	+				+1.7
4,344,354	-				+0.3
4,344,368	+				+0.2
4,344,368	+				-0.8
4,344,368	+				-0.9
4,344,368	+				+0.5
4,344,369	-				+0.3
4,344,369	-				+1.3
4,344,369	-				-1.1
4,344,369	-				-0.2
4,344,369	-				-0.6
4,344,387	+				-0.3
4,344,388	-				-0.3
4,344,388	-				-0.1
4,344,405	+				-0.0
4,344,459	+				+1.1
4,344,544	-				-0.8
4,344,697	-		PP_3818	0.21	+2.4
4,344,924	+		PP_3818	0.38	+0.8
4,344,925	-		PP_3818	0.38	+0.4
4,344,947	+		PP_3818	0.40	+2.7
4,344,947	+		PP_3818	0.40	+0.4
4,345,117	-		PP_3818	0.53	-0.4
4,345,117	-		PP_3818	0.53	+0.8
4,345,226	+		PP_3818	0.61	-0.7
4,345,227	-		PP_3818	0.61	-0.7