Strain Fitness in Pseudomonas putida KT2440 around PP_5167

Experiment: MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL
5,891,701	+				-0.5
5,891,739	-				-1.2
5,891,739	-				+0.3
5,891,747	-				+0.7
5,891,764	-				+0.5
5,891,767	+				-0.0
5,891,794	+				+1.3
5,891,794	+				+0.4
5,891,794	+				-0.7
5,891,794	+				+0.4
5,891,794	+				+0.4
5,891,794	+				-0.3
5,891,794	+				+0.4
5,891,794	+				+1.3
5,891,795	-				-0.4
5,891,795	-				+0.5
5,891,795	-				-0.3
5,891,974	+		PP_5166	0.22	+0.4
5,891,974	+		PP_5166	0.22	+0.0
5,891,974	+		PP_5166	0.22	+0.2
5,891,975	-		PP_5166	0.22	+0.0
5,891,975	-		PP_5166	0.22	+0.2
5,891,989	+		PP_5166	0.24	-0.3
5,892,068	-		PP_5166	0.33	-0.6
5,892,250	+		PP_5166	0.55	+0.3
5,892,251	-		PP_5166	0.55	-1.7
5,892,324	-		PP_5166	0.64	+0.0
5,892,349	+		PP_5166	0.67	+0.3
5,892,350	-		PP_5166	0.67	+1.6
5,892,531	-		PP_5166	0.89	+0.2
5,892,591	+				+0.2
5,892,592	-				-1.2
5,892,679	+				+0.7
5,892,679	+				-0.2
5,892,735	-				+0.8
5,892,741	-				+0.3
5,892,840	-		PP_5167	0.26	+0.1
5,892,840	-		PP_5167	0.26	+0.9
5,893,006	+		PP_5167	0.55	+0.9
5,893,007	-		PP_5167	0.55	+0.6
5,893,248	-				+1.3
5,893,248	-				-0.5
5,893,284	+				+1.1
5,893,284	+				-1.3
5,893,308	+				+0.4
5,893,308	+				+0.9
5,893,308	+				+1.4
5,893,308	+				-1.6
5,893,308	+				+1.9
5,893,308	+				-0.0
5,893,308	+				+0.3
5,893,308	+				-1.6
5,893,308	+				+0.5
5,893,308	+				-0.5
5,893,308	+				+0.6
5,893,309	-				-0.6
5,893,309	-				+1.3
5,893,309	-				+0.7
5,893,309	-				+0.1
5,893,309	-				-0.1
5,893,309	-				-0.0
5,893,309	-				-0.0
5,893,309	-				-1.1
5,893,309	-				-0.9
5,893,309	-				+0.6
5,893,309	-				-1.6
5,893,309	-				+0.6
5,893,309	-				-0.5
5,893,309	-				+3.1
5,893,310	+				-0.1
5,893,310	+				-0.4
5,893,311	-				+0.6
5,893,311	-				-0.6
5,893,407	+				+1.5
5,893,407	+				-0.3
5,893,408	-				+0.3
5,893,408	-				+0.5
5,893,481	+				-0.1
5,893,481	+				+0.6
5,893,481	+				-0.2
5,893,481	+				+0.1
5,893,481	+				-0.7
5,893,481	+				+1.1
5,893,482	-				-0.5
5,893,482	-				+2.3
5,893,482	-				+0.9
5,893,482	-				+2.3
5,893,482	-				+0.9
5,893,482	-				-0.4
5,893,482	-				-0.1
5,893,485	+				+0.1
5,893,486	-				-0.3
5,893,770	-		PP_5168	0.29	+1.3
5,893,796	+		PP_5168	0.32	+0.3
5,893,797	-		PP_5168	0.32	-0.5
5,894,222	+		PP_5168	0.75	-0.6