Strain Fitness in Pseudomonas putida KT2440 around PP_2452

Experiment: MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL
2,798,025	+				-0.4
2,798,025	+				-0.0
2,798,026	-				+0.1
2,798,148	+		PP_2451	0.15	+1.3
2,798,205	+		PP_2451	0.23	+0.0
2,798,206	-		PP_2451	0.23	-0.1
2,798,206	-		PP_2451	0.23	-0.7
2,798,206	-		PP_2451	0.23	+0.3
2,798,206	-		PP_2451	0.23	-0.4
2,798,206	-		PP_2451	0.23	+0.3
2,798,220	+		PP_2451	0.25	-0.1
2,798,220	+		PP_2451	0.25	+1.0
2,798,220	+		PP_2451	0.25	-0.8
2,798,221	-		PP_2451	0.25	-0.6
2,798,221	-		PP_2451	0.25	+0.6
2,798,226	+		PP_2451	0.26	+0.2
2,798,226	+		PP_2451	0.26	+0.7
2,798,226	+		PP_2451	0.26	+0.0
2,798,227	-		PP_2451	0.26	+0.9
2,798,227	-		PP_2451	0.26	+1.9
2,798,310	+		PP_2451	0.38	+0.3
2,798,310	+		PP_2451	0.38	-0.3
2,798,310	+		PP_2451	0.38	+0.1
2,798,418	+		PP_2451	0.54	+0.6
2,798,418	+		PP_2451	0.54	-0.3
2,798,418	+		PP_2451	0.54	-0.4
2,798,419	-		PP_2451	0.54	-0.1
2,798,499	-		PP_2451	0.66	+0.3
2,798,589	+		PP_2451	0.78	-0.4
2,798,590	-		PP_2451	0.79	+0.7
2,798,590	-		PP_2451	0.79	+0.6
2,798,593	+		PP_2451	0.79	-1.5
2,798,594	-		PP_2451	0.79	+0.1
2,798,628	+		PP_2451	0.84	-0.3
2,798,628	+		PP_2451	0.84	-0.3
2,798,628	+		PP_2451	0.84	-0.0
2,798,628	+		PP_2451	0.84	+0.7
2,798,628	+		PP_2451	0.84	-0.1
2,798,629	-		PP_2451	0.84	-3.4
2,798,629	-		PP_2451	0.84	+0.2
2,798,629	-		PP_2451	0.84	-0.0
2,798,702	+				-0.3
2,798,702	+				-0.0
2,798,936	+		PP_2452	0.79	-2.0
2,798,936	+		PP_2452	0.79	-0.5
2,798,936	+		PP_2452	0.79	+0.0
2,798,936	+		PP_2452	0.79	-0.2
2,798,936	+		PP_2452	0.79	+1.6
2,798,937	-		PP_2452	0.79	+0.3
2,798,937	-		PP_2452	0.79	+1.2
2,798,937	-		PP_2452	0.79	+0.9
2,798,937	-		PP_2452	0.79	+0.5
2,798,952	+		PP_2452	0.86	+0.3
2,798,952	+		PP_2452	0.86	+1.4
2,798,952	+		PP_2452	0.86	+0.6
2,798,953	-		PP_2452	0.86	-0.2
2,798,953	-		PP_2452	0.86	-0.0
2,799,079	+				+0.4
2,799,080	-				-0.0
2,799,206	+				-1.0
2,799,260	-				-0.1
2,799,349	+		PP_2453	0.13	+0.6
2,799,504	-		PP_2453	0.28	+1.1
2,799,533	+		PP_2453	0.30	+0.1
2,799,534	-		PP_2453	0.30	-0.1
2,799,534	-		PP_2453	0.30	-1.1
2,799,534	-		PP_2453	0.30	+0.1
2,799,794	+		PP_2453	0.54	-0.7
2,799,794	+		PP_2453	0.54	+0.1
2,799,878	-		PP_2453	0.62	-0.6