Strain Fitness in Pseudomonas putida KT2440 around PP_1328
Experiment: MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,512,519 | + | PP_1326 | 0.88 | +0.7 | |
1,512,519 | + | PP_1326 | 0.88 | -1.4 | |
1,512,593 | + | -1.0 | |||
1,512,593 | + | +0.0 | |||
1,512,593 | + | -0.4 | |||
1,512,594 | - | -0.3 | |||
1,512,594 | - | +0.9 | |||
1,512,594 | - | -0.8 | |||
1,512,626 | + | -0.2 | |||
1,512,642 | + | -0.5 | |||
1,512,642 | + | +0.1 | |||
1,512,643 | - | +0.4 | |||
1,513,095 | + | +0.6 | |||
1,513,138 | + | -0.0 | |||
1,513,235 | + | -0.1 | |||
1,513,250 | + | -0.2 | |||
1,513,299 | + | -0.4 | |||
1,513,299 | + | +0.6 | |||
1,513,299 | + | +1.1 | |||
1,513,301 | + | -1.2 | |||
1,513,301 | + | -1.7 | |||
1,513,357 | + | -0.9 | |||
1,513,546 | + | PP_1328 | 0.39 | +1.2 | |
1,513,546 | + | PP_1328 | 0.39 | +0.4 | |
1,513,546 | + | PP_1328 | 0.39 | +0.3 | |
1,513,546 | + | +0.8 |
Or see this region's nucleotide sequence