Strain Fitness in Pseudomonas putida KT2440 around PP_1114

Experiment: MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL
1,272,508	+		PP_1113	0.22	+1.0
1,272,679	+		PP_1113	0.41	+0.9
1,272,680	-		PP_1113	0.41	+0.9
1,272,680	-		PP_1113	0.41	+0.8
1,272,680	-		PP_1113	0.41	+0.8
1,272,680	-		PP_1113	0.41	+1.5
1,272,680	-		PP_1113	0.41	+0.7
1,272,680	-		PP_1113	0.41	+1.0
1,272,685	+				+1.9
1,272,685	+		PP_1113	0.42	+1.2
1,272,832	-		PP_1113	0.58	+0.9
1,273,040	-		PP_1113	0.81	+1.3
1,273,065	+		PP_1113	0.84	-0.3
1,273,068	+		PP_1113	0.84	-0.4
1,273,068	+		PP_1113	0.84	+0.8
1,273,069	-		PP_1113	0.84	+0.9
1,273,069	-		PP_1113	0.84	-0.2
1,273,069	-		PP_1113	0.84	+0.5
1,273,120	+				+0.9
1,273,150	+				+1.0
1,273,151	-				+1.5
1,273,151	-				+0.8
1,273,362	+				-0.3
1,273,399	+		PP_1114	0.11	+0.1
1,273,400	-		PP_1114	0.12	+0.5
1,273,500	+		PP_1114	0.62	+0.9
1,273,500	+		PP_1114	0.62	+0.9
1,273,500	+		PP_1114	0.62	-1.8
1,273,500	+		PP_1114	0.62	+0.5
1,273,501	-		PP_1114	0.63	+1.3
1,273,501	-		PP_1114	0.63	+0.9
1,273,591	+				-0.1
1,273,595	+				-2.1
1,273,596	-				+0.7
1,273,596	-				+0.1
1,273,596	-				-0.6
1,273,610	-				+0.3
1,273,683	-		PP_1115	0.20	-0.5
1,273,799	-		PP_1115	0.43	+1.3
1,273,822	+		PP_1115	0.48	+0.4
1,273,823	-		PP_1115	0.48	-0.5
1,273,840	+		PP_1115	0.51	+0.7
1,273,840	+		PP_1115	0.51	-0.4
1,273,840	+		PP_1115	0.51	+3.9
1,273,840	+		PP_1115	0.51	-0.6
1,273,840	+		PP_1115	0.51	+0.5
1,273,841	-		PP_1115	0.51	+0.2
1,273,847	+		PP_1115	0.53	-0.4
1,273,847	+		PP_1115	0.53	-0.4
1,273,847	+		PP_1115	0.53	+0.8
1,273,847	+		PP_1115	0.53	-0.3
1,273,847	+		PP_1115	0.53	-0.6
1,273,847	+		PP_1115	0.53	-0.9
1,273,848	-		PP_1115	0.53	+1.1
1,273,848	-		PP_1115	0.53	+0.2
1,274,033	-		PP_1115	0.89	-0.3
1,274,071	+				+0.4
1,274,130	+				+0.4
1,274,131	-				+1.0
1,274,158	+				+0.3
1,274,164	+				-0.4
1,274,164	+				-0.4
1,274,164	+				-0.9
1,274,164	+				+0.9
1,274,165	-				-1.4
1,274,181	+				-0.1
1,274,181	+				+0.4
1,274,201	+				-0.2
1,274,202	-				-0.9
1,274,243	-				-2.1
1,274,250	-				-0.3
1,274,250	-				+0.4
1,274,250	-				+0.4
1,274,250	-				+0.3
1,274,320	+				+0.6
1,274,321	-				+2.2
1,274,321	-				+0.1
1,274,349	-				+0.1
1,274,349	-				+0.3
1,274,378	+				-1.5
1,274,379	-				+0.4
1,274,402	-				-1.7
1,274,443	+				-0.2
1,274,470	+				-0.4
1,274,534	-				+0.3
1,274,549	+				-0.2
1,274,549	+				+0.4