Strain Fitness in Pseudomonas putida KT2440 around PP_3179

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
3,602,808	+		PP_3178	0.19	-0.1
3,602,809	-		PP_3178	0.19	+0.8
3,603,324	+		PP_3178	0.64	-1.0
3,603,324	+		PP_3178	0.64	-1.5
3,603,324	+		PP_3178	0.64	+0.2
3,603,325	-		PP_3178	0.64	-2.9
3,603,583	-		PP_3178	0.87	-0.4
3,603,594	+		PP_3178	0.88	-0.9
3,603,594	+		PP_3178	0.88	+1.5
3,603,594	+		PP_3178	0.88	-1.6
3,603,594	+		PP_3178	0.88	-1.0
3,603,594	+		PP_3178	0.88	+0.3
3,603,594	+		PP_3178	0.88	+0.3
3,603,595	-		PP_3178	0.88	-0.5
3,603,595	-		PP_3178	0.88	-0.9
3,603,595	-		PP_3178	0.88	+0.7
3,603,595	-		PP_3178	0.88	-1.0
3,603,595	-		PP_3178	0.88	-0.0
3,603,595	-		PP_3178	0.88	+0.3
3,603,595	-		PP_3178	0.88	-0.9
3,603,617	-		PP_3178	0.90	-0.9
3,603,617	-		PP_3178	0.90	+0.3
3,603,698	+				-2.1
3,603,755	+				+0.1
3,603,827	+				+0.0
3,603,827	+				+0.4
3,603,827	+				-0.5
3,603,827	+				+0.3
3,603,828	-				-1.1
3,603,828	-				-0.6
3,603,828	-				+0.1
3,603,828	-				-1.5
3,604,291	+		PP_3179	0.60	+0.0
3,604,292	-		PP_3179	0.60	+0.4
3,604,292	-		PP_3179	0.60	-0.5
3,604,292	-		PP_3179	0.60	-0.0
3,604,302	-		PP_3179	0.61	+0.5
3,604,347	-		PP_3179	0.66	+1.3
3,604,347	-		PP_3179	0.66	+1.3
3,604,846	+				+0.8
3,604,956	-		PP_3180	0.17	+0.3
3,605,033	+		PP_3180	0.24	-1.3
3,605,033	+		PP_3180	0.24	+0.0
3,605,034	-		PP_3180	0.24	+0.2
3,605,045	-		PP_3180	0.25	-0.4
3,605,244	-		PP_3180	0.44	-0.9
3,605,320	+		PP_3180	0.52	-0.0
3,605,321	-		PP_3180	0.52	+0.8
3,605,457	-		PP_3180	0.65	+0.2
3,605,468	+		PP_3180	0.66	-0.1
3,605,607	-		PP_3180	0.79	-0.4
3,605,621	+		PP_3180	0.81	-1.1
3,605,649	+		PP_3180	0.83	-0.0