Strain Fitness in Pseudomonas putida KT2440 around PP_2999

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
3,394,467	+				-3.5
3,394,468	-				+0.4
3,394,663	+		PP_2998	0.17	-0.4
3,394,664	-		PP_2998	0.17	-0.5
3,394,690	+		PP_2998	0.20	+1.2
3,394,774	+		PP_2998	0.29	-0.2
3,394,875	+		PP_2998	0.40	+0.7
3,394,875	+		PP_2998	0.40	+0.7
3,394,875	+		PP_2998	0.40	+0.3
3,394,876	-		PP_2998	0.40	+1.5
3,394,876	-		PP_2998	0.40	+0.4
3,394,876	-		PP_2998	0.40	+0.2
3,394,876	-		PP_2998	0.40	-0.9
3,395,122	-		PP_2998	0.66	+0.1
3,395,402	+				-0.1
3,395,463	-				-0.9
3,395,580	-		PP_2999	0.34	+0.8
3,395,902	+		PP_3000	0.14	+1.7
3,395,902	+		PP_3000	0.14	+0.3
3,395,903	-		PP_3000	0.14	-0.0
3,395,903	-		PP_3000	0.14	+0.2
3,395,933	-		PP_3000	0.21	-0.7
3,395,981	-		PP_3000	0.31	-1.5
3,395,981	-		PP_3000	0.31	-0.3
3,396,287	+				-0.0
3,396,288	-				-3.3
3,396,334	-				+0.6
3,396,357	+				+0.4
3,396,357	+				-0.0
3,396,357	+				-0.3
3,396,586	-		PP_3001	0.24	-0.7
3,396,657	+		PP_3001	0.30	-1.1
3,396,658	-		PP_3001	0.30	+0.0
3,396,788	+		PP_3001	0.40	+0.7
3,396,807	+				+0.3
3,396,808	-		PP_3001	0.42	-1.3
3,396,808	-		PP_3001	0.42	+2.2
3,396,808	-		PP_3001	0.42	-0.2
3,396,808	-		PP_3001	0.42	+0.1