Strain Fitness in Pseudomonas putida KT2440 around PP_2923

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
3,322,061	+				-0.7
3,322,061	+				-0.7
3,322,062	-				-0.1
3,322,064	+				-0.7
3,322,065	-				+0.2
3,322,076	-				-1.5
3,322,103	+		PP_2922	0.10	-0.7
3,322,103	+		PP_2922	0.10	+0.1
3,322,391	+		PP_2922	0.40	-1.8
3,322,391	+		PP_2922	0.40	-0.3
3,322,556	+		PP_2922	0.57	-0.3
3,323,240	+		PP_2923	0.24	+0.3
3,323,243	+		PP_2923	0.24	-1.0
3,323,244	-		PP_2923	0.24	+0.1
3,323,244	-		PP_2923	0.24	+1.2
3,323,244	-		PP_2923	0.24	+0.6
3,323,448	-		PP_2923	0.48	+0.1
3,323,974	+				+0.7
3,323,975	-				-1.5
3,324,041	-		PP_2924	0.13	-0.7
3,324,081	+		PP_2924	0.16	+0.5
3,324,081	+		PP_2924	0.16	-0.0
3,324,081	+		PP_2924	0.16	-1.0
3,324,081	+		PP_2924	0.16	+0.3
3,324,082	-		PP_2924	0.16	+0.3
3,324,082	-		PP_2924	0.16	-0.4
3,324,241	+		PP_2924	0.29	+0.7
3,324,241	+		PP_2924	0.29	+0.7
3,324,242	-		PP_2924	0.29	+0.3
3,324,274	+		PP_2924	0.31	-1.5
3,324,274	+		PP_2924	0.31	-0.5
3,324,355	+		PP_2924	0.38	+0.4
3,324,356	-		PP_2924	0.38	-0.7
3,324,356	-		PP_2924	0.38	+2.3
3,324,356	-		PP_2924	0.38	+1.1
3,324,356	-		PP_2924	0.38	-0.8
3,324,386	-		PP_2924	0.40	+0.2
3,324,413	+		PP_2924	0.42	+0.4
3,324,413	+		PP_2924	0.42	+0.3
3,324,414	-		PP_2924	0.42	-0.9
3,324,414	-		PP_2924	0.42	+0.1
3,324,642	+		PP_2924	0.61	-1.1
3,324,643	-		PP_2924	0.61	+0.2
3,324,685	+		PP_2924	0.64	-2.1
3,324,685	+		PP_2924	0.64	-0.1
3,324,685	+		PP_2924	0.64	+0.3
3,324,686	-		PP_2924	0.64	-0.5
3,324,748	+		PP_2924	0.69	-2.3
3,324,749	-		PP_2924	0.69	-0.0