Strain Fitness in Pseudomonas putida KT2440 around PP_2857

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
3,259,532	-		PP_2856	0.55	+0.1
3,259,548	+		PP_2856	0.56	+0.4
3,259,549	-		PP_2856	0.56	-0.8
3,259,571	+		PP_2856	0.57	-1.5
3,259,758	+		PP_2856	0.70	+0.1
3,259,758	+		PP_2856	0.70	-0.3
3,259,759	-		PP_2856	0.70	-0.3
3,259,913	+		PP_2856	0.81	+2.1
3,259,913	+		PP_2856	0.81	+0.8
3,259,913	+		PP_2856	0.81	-0.1
3,260,034	+		PP_2856	0.89	+1.1
3,260,077	+				-1.7
3,260,078	-				+0.9
3,260,078	-				-0.2
3,260,101	+				-0.3
3,260,126	+				-1.2
3,260,127	-				-0.1
3,260,209	+				-0.4
3,260,210	-				-0.7
3,260,212	+				-0.6
3,260,231	-				-0.7
3,260,348	+		PP_2857	0.18	+1.1
3,260,710	+		PP_2857	0.81	+0.6
3,260,896	-		PP_2858	0.17	-1.0
3,261,096	+		PP_2858	0.63	-0.7
3,261,208	+		PP_2858	0.88	+0.5
3,261,209	-		PP_2858	0.89	+0.3
3,261,223	+				-1.4
3,261,223	+				-0.1
3,261,226	+				+0.5
3,261,226	+				+0.1
3,261,226	+				-1.1
3,261,226	+				-2.5
3,261,226	+				+0.0
3,261,226	+				-0.1
3,261,226	+				-0.4
3,261,227	-				-0.6
3,261,227	-				-1.7
3,261,227	-				+0.5
3,261,233	+				+0.3
3,261,233	+				+0.0
3,261,234	-				-0.0
3,261,354	-				-0.1
3,261,600	+				+1.8
3,261,600	+				-0.4
3,261,601	-				+0.7
3,261,601	-				+0.0
3,261,652	+		PP_2859	0.17	-0.8
3,261,652	+		PP_2859	0.17	+0.6