Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2759 and PP_2760 overlap by 23 nucleotides PP_2760 and PP_2761 are separated by 1 nucleotides
PP_2759: PP_2759 - ribose ABC transporter - ATP-binding subunit, at 3,143,077 to 3,144,615
_2759
PP_2760: PP_2760 - putative ribose transport permease protein, at 3,144,593 to 3,145,576
_2760
PP_2761: PP_2761 - putative Ribose ABC transporter, permease protein, at 3,145,578 to 3,146,564
_2761
Position (kb)
3144
3145
3146 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3143.665 kb on + strand, within PP_2759 at 3143.677 kb on + strand, within PP_2759 at 3144.382 kb on + strand, within PP_2759 at 3144.592 kb on + strand at 3144.593 kb on - strand at 3144.593 kb on - strand at 3144.593 kb on - strand at 3144.598 kb on + strand at 3144.598 kb on + strand at 3144.598 kb on + strand at 3144.599 kb on - strand at 3144.609 kb on + strand at 3144.744 kb on + strand at 3144.745 kb on - strand, within PP_2760 at 3145.178 kb on + strand, within PP_2760 at 3145.178 kb on + strand, within PP_2760 at 3145.202 kb on + strand at 3145.202 kb on + strand, within PP_2760 at 3145.232 kb on - strand, within PP_2760 at 3145.259 kb on + strand, within PP_2760 at 3145.274 kb on + strand, within PP_2760 at 3145.274 kb on + strand, within PP_2760 at 3145.275 kb on - strand, within PP_2760 at 3145.679 kb on - strand, within PP_2761 at 3145.738 kb on + strand, within PP_2761 at 3145.785 kb on + strand, within PP_2761 at 3145.884 kb on + strand, within PP_2761 at 3145.885 kb on - strand, within PP_2761 at 3145.885 kb on - strand, within PP_2761 at 3145.961 kb on + strand, within PP_2761 at 3145.961 kb on + strand, within PP_2761 at 3145.962 kb on - strand, within PP_2761 at 3146.047 kb on - strand, within PP_2761 at 3146.047 kb on - strand, within PP_2761 at 3146.149 kb on + strand, within PP_2761 at 3146.431 kb on + strand, within PP_2761 at 3146.432 kb on - strand, within PP_2761 at 3146.432 kb on - strand, within PP_2761
Per-strain Table
Position Strand Gene LocusTag Fraction MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL remove 3,143,665 + PP_2759 0.38 -1.6 3,143,677 + PP_2759 0.39 +0.9 3,144,382 + PP_2759 0.85 -0.1 3,144,592 + -2.0 3,144,593 - -1.6 3,144,593 - +0.2 3,144,593 - +0.1 3,144,598 + -0.9 3,144,598 + -0.1 3,144,598 + -0.3 3,144,599 - +0.1 3,144,609 + +0.1 3,144,744 + +1.6 3,144,745 - PP_2760 0.15 -0.0 3,145,178 + PP_2760 0.59 +0.0 3,145,178 + PP_2760 0.59 +0.5 3,145,202 + -0.0 3,145,202 + PP_2760 0.62 -1.6 3,145,232 - PP_2760 0.65 +1.1 3,145,259 + PP_2760 0.68 +0.3 3,145,274 + PP_2760 0.69 +0.9 3,145,274 + PP_2760 0.69 +0.7 3,145,275 - PP_2760 0.69 +0.4 3,145,679 - PP_2761 0.10 +0.4 3,145,738 + PP_2761 0.16 +0.3 3,145,785 + PP_2761 0.21 +0.1 3,145,884 + PP_2761 0.31 -2.9 3,145,885 - PP_2761 0.31 +0.2 3,145,885 - PP_2761 0.31 +1.6 3,145,961 + PP_2761 0.39 -0.7 3,145,961 + PP_2761 0.39 -0.2 3,145,962 - PP_2761 0.39 +0.4 3,146,047 - PP_2761 0.48 -0.6 3,146,047 - PP_2761 0.48 +0.7 3,146,149 + PP_2761 0.58 -1.1 3,146,431 + PP_2761 0.86 -0.5 3,146,432 - PP_2761 0.87 -1.4 3,146,432 - PP_2761 0.87 -0.0
Or see this region's nucleotide sequence