Strain Fitness in Pseudomonas putida KT2440 around PP_2593

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
2,962,074	+		PP_2591	0.82	-0.6
2,962,075	-		PP_2591	0.83	-0.6
2,962,090	+		PP_2591	0.84	-0.0
2,962,090	+		PP_2591	0.84	-0.7
2,962,091	-		PP_2591	0.84	-0.2
2,962,180	-				-0.9
2,962,246	-				-0.2
2,962,600	-		PP_2592	0.49	-0.2
2,962,777	-		PP_2592	0.72	-0.2
2,962,777	-		PP_2592	0.72	-0.9
2,962,820	+		PP_2592	0.78	+1.4
2,962,820	+		PP_2592	0.78	+0.3
2,962,962	+				-0.0
2,962,987	+				+0.4
2,962,988	-				-0.4
2,963,030	+				-0.5
2,963,030	+				+0.1
2,963,031	-				-1.3
2,963,031	-				+0.2
2,963,031	-				-1.1
2,963,075	+				+0.3
2,963,183	+		PP_2593	0.20	-0.0
2,963,184	-		PP_2593	0.21	+0.7
2,963,294	+		PP_2593	0.32	+0.9
2,963,295	-		PP_2593	0.32	+0.8
2,963,295	-		PP_2593	0.32	-0.2
2,963,552	+		PP_2593	0.60	+0.2
2,963,553	-		PP_2593	0.60	+0.8
2,963,617	+		PP_2593	0.67	+1.6
2,963,617	+		PP_2593	0.67	+0.0
2,963,618	-				-1.1
2,963,709	-		PP_2593	0.76	+1.2
2,963,721	-		PP_2593	0.78	+0.1
2,963,847	-				-0.4
2,963,847	-				-0.1
2,964,193	-		PP_2594	0.28	+0.1
2,964,226	+		PP_2594	0.32	+0.6
2,964,226	+		PP_2594	0.32	+0.1
2,964,289	+		PP_2594	0.38	+1.6
2,964,289	+		PP_2594	0.38	+0.2
2,964,295	+		PP_2594	0.39	+0.6
2,964,296	-		PP_2594	0.39	+1.5
2,964,296	-		PP_2594	0.39	-0.0
2,964,296	-		PP_2594	0.39	-0.0
2,964,410	-		PP_2594	0.51	+0.2
2,964,415	+		PP_2594	0.52	-0.2
2,964,415	+		PP_2594	0.52	+0.1
2,964,416	-		PP_2594	0.52	+0.2
2,964,449	-		PP_2594	0.55	+0.6
2,964,493	-		PP_2594	0.60	+0.0
2,964,714	+		PP_2594	0.83	-0.3
2,964,715	-		PP_2594	0.84	+0.3
2,964,779	+				-0.7