Strain Fitness in Pseudomonas putida KT2440 around PP_1619

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
1,814,144	+		PP_1617	0.58	-0.7
1,814,407	+		PP_1617	0.89	-0.9
1,814,407	+		PP_1617	0.89	-2.1
1,814,408	-		PP_1617	0.89	+0.5
1,814,428	+				+0.6
1,814,428	+				-0.1
1,814,428	+				-0.4
1,814,428	+				+0.2
1,814,428	+				-0.4
1,814,428	+				-0.3
1,814,428	+				+2.1
1,814,428	+				+0.3
1,814,428	+				+0.2
1,814,428	+				-0.7
1,814,429	-				-0.1
1,814,429	-				-1.5
1,814,429	-				-0.1
1,814,429	-				-0.0
1,814,429	-				-0.3
1,814,429	-				-0.6
1,814,429	-				-0.4
1,814,429	-				+0.7
1,814,432	+				+0.8
1,814,432	+				+1.1
1,814,432	+				-3.2
1,814,432	+				-1.5
1,814,432	+				-0.8
1,814,432	+				-0.5
1,814,432	+				+0.3
1,814,433	-				+2.1
1,814,433	-				+0.2
1,814,435	+				-0.2
1,814,436	-				+0.6
1,814,436	-				+0.3
1,814,436	-				+0.0
1,814,498	+				+1.9
1,815,187	+				-1.8
1,815,187	+				-0.4
1,815,188	-				-1.0
1,815,188	-				+1.4
1,815,189	+		PP_1619	0.10	+0.7
1,815,189	+		PP_1619	0.10	-0.1
1,815,189	+		PP_1619	0.10	+0.7
1,815,190	-		PP_1619	0.10	+1.1
1,815,190	-		PP_1619	0.10	+0.8
1,815,190	-		PP_1619	0.10	+2.4
1,815,309	-		PP_1619	0.21	-0.9
1,815,564	-		PP_1619	0.45	+0.1
1,815,564	-		PP_1619	0.45	-1.7
1,815,690	-		PP_1619	0.57	+0.9
1,816,017	-				-0.2
1,816,017	-		PP_1619	0.88	+2.1
1,816,017	-		PP_1619	0.88	-0.1
1,816,030	+		PP_1619	0.89	+0.3
1,816,134	+				-0.6
1,816,134	+				-1.3
1,816,205	-		PP_1620	0.10	-0.1
1,816,432	+		PP_1620	0.40	+0.9
1,816,432	+		PP_1620	0.40	+0.2
1,816,432	+		PP_1620	0.40	+0.5
1,816,479	+		PP_1620	0.47	-0.2
1,816,537	+		PP_1620	0.54	-0.3
1,816,537	+		PP_1620	0.54	+0.0
1,816,537	+		PP_1620	0.54	-1.1
1,816,538	-		PP_1620	0.55	+0.5
1,816,538	-		PP_1620	0.55	+0.1
1,816,596	-		PP_1620	0.62	+0.6
1,816,596	-		PP_1620	0.62	+1.1
1,816,608	+		PP_1620	0.64	+0.3
1,816,792	+		PP_1620	0.88	-0.4
1,816,792	+		PP_1620	0.88	-2.3
1,816,792	+		PP_1620	0.88	+0.5
1,816,793	-		PP_1620	0.89	+0.6
1,816,793	-		PP_1620	0.89	-0.6
1,816,793	-		PP_1620	0.89	+0.9
1,816,796	+		PP_1620	0.89	+1.1
1,816,796	+		PP_1620	0.89	-0.5
1,816,797	-		PP_1620	0.89	+0.9
1,816,892	+				-1.8
1,816,892	+				+0.1
1,816,892	+				-0.9
1,816,929	+		PP_1621	0.10	+1.2
1,817,049	+		PP_1621	0.28	+0.1
1,817,049	+		PP_1621	0.28	+1.1