Strain Fitness in Pseudomonas putida KT2440 around PP_0899

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
1,039,444	-				+0.6
1,039,514	-				+1.4
1,039,514	-				+0.6
1,039,514	-				-0.5
1,039,608	+				+0.3
1,039,608	+				+0.1
1,039,609	-				-0.6
1,039,738	-		PP_0899	0.10	+0.7
1,039,738	-		PP_0899	0.10	+1.7
1,039,738	-		PP_0899	0.10	+0.1
1,039,738	-		PP_0899	0.10	+1.2
1,039,897	-		PP_0899	0.27	+1.9
1,039,897	-		PP_0899	0.27	+1.5
1,040,026	+		PP_0899	0.41	-0.2
1,040,046	+		PP_0899	0.44	+0.7
1,040,047	-		PP_0899	0.44	-2.1
1,040,047	-		PP_0899	0.44	-0.3
1,040,047	-		PP_0899	0.44	-2.2
1,040,193	+		PP_0899	0.60	+1.0
1,040,193	+		PP_0899	0.60	+0.4
1,040,194	-		PP_0899	0.60	+0.8
1,040,194	-		PP_0899	0.60	+0.7
1,040,264	+		PP_0899	0.67	+0.2
1,040,314	+		PP_0899	0.73	+0.1
1,040,314	+		PP_0899	0.73	-2.3
1,040,314	+		PP_0899	0.73	+0.8
1,040,315	-		PP_0899	0.73	+1.3
1,040,315	-		PP_0899	0.73	+0.7
1,040,315	-		PP_0899	0.73	+1.1
1,040,315	-		PP_0899	0.73	-0.6
1,040,315	-		PP_0899	0.73	+0.8
1,040,315	-		PP_0899	0.73	+0.9
1,040,315	-		PP_0899	0.73	+1.0
1,040,566	+				-0.2
1,040,566	+				-1.1
1,040,567	-				-1.6
1,040,668	-				-1.0
1,040,668	-				+0.3
1,040,670	+				-0.8
1,040,670	+				+1.4
1,040,670	+				-0.2
1,040,670	+				-1.4
1,040,670	+				+0.1
1,040,671	-				-0.6
1,040,671	-				+0.2
1,040,763	-		PP_0900	0.22	-0.0
1,040,786	+		PP_0900	0.25	+0.7
1,040,932	-		PP_0900	0.45	-1.1
1,041,168	+		PP_0900	0.77	-0.1
1,041,300	+				+1.5
1,041,459	+				-0.0
1,041,460	-				-1.6
1,041,460	-				+0.5
1,041,460	-				-0.7
1,041,467	-				-0.2
1,041,550	+				-0.3