Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0507 and PP_0508 are separated by 0 nucleotides PP_0508 and PP_0509 are separated by 130 nucleotides PP_0509 and PP_0510 are separated by 151 nucleotides
PP_0507: PP_0507 - putative ABC efflux transporter, ATP-binding protein, at 596,153 to 596,863
_0507
PP_0508: PP_0508 - conserved exported protein of unknown function, at 596,864 to 597,445
_0508
PP_0509: PP_0509 - conserved protein of unknown function, at 597,576 to 597,920
_0509
PP_0510: PP_0510 - Thioredoxin, at 598,072 to 598,944
_0510
Position (kb) 597
598 Strain fitness (log2 ratio) -1
0
1
2 at 596.599 kb on + strand, within PP_0507 at 596.599 kb on + strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.600 kb on - strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.601 kb on + strand, within PP_0507 at 596.602 kb on - strand, within PP_0507 at 596.602 kb on - strand, within PP_0507 at 597.024 kb on + strand, within PP_0508 at 597.025 kb on - strand, within PP_0508 at 597.025 kb on - strand, within PP_0508 at 597.295 kb on + strand, within PP_0508 at 597.327 kb on - strand, within PP_0508 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.630 kb on - strand, within PP_0509 at 597.679 kb on + strand, within PP_0509 at 597.904 kb on - strand at 597.904 kb on - strand at 598.192 kb on - strand, within PP_0510 at 598.232 kb on + strand, within PP_0510 at 598.233 kb on - strand, within PP_0510 at 598.311 kb on + strand, within PP_0510 at 598.311 kb on + strand, within PP_0510 at 598.466 kb on + strand, within PP_0510 at 598.466 kb on + strand, within PP_0510 at 598.516 kb on + strand, within PP_0510 at 598.517 kb on - strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.606 kb on + strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510 at 598.607 kb on - strand, within PP_0510
Per-strain Table
Position Strand Gene LocusTag Fraction MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL remove 596,599 + PP_0507 0.63 +0.4 596,599 + PP_0507 0.63 +0.5 596,600 - PP_0507 0.63 -1.5 596,600 - PP_0507 0.63 -1.0 596,600 - PP_0507 0.63 -1.1 596,600 - PP_0507 0.63 -0.7 596,600 - PP_0507 0.63 +1.3 596,601 + PP_0507 0.63 -0.7 596,601 + PP_0507 0.63 +0.6 596,601 + PP_0507 0.63 +1.5 596,601 + PP_0507 0.63 +2.5 596,602 - PP_0507 0.63 +0.8 596,602 - PP_0507 0.63 -0.8 597,024 + PP_0508 0.27 -1.4 597,025 - PP_0508 0.28 -1.5 597,025 - PP_0508 0.28 -1.6 597,295 + PP_0508 0.74 -0.6 597,327 - PP_0508 0.80 -0.0 597,630 - PP_0509 0.16 +0.0 597,630 - PP_0509 0.16 +0.7 597,630 - PP_0509 0.16 -0.0 597,630 - PP_0509 0.16 +1.6 597,679 + PP_0509 0.30 -0.7 597,904 - -0.6 597,904 - +0.4 598,192 - PP_0510 0.14 -1.5 598,232 + PP_0510 0.18 -0.4 598,233 - PP_0510 0.18 -0.2 598,311 + PP_0510 0.27 +0.0 598,311 + PP_0510 0.27 -1.5 598,466 + PP_0510 0.45 +0.7 598,466 + PP_0510 0.45 +0.8 598,516 + PP_0510 0.51 -0.0 598,517 - PP_0510 0.51 +1.0 598,606 + PP_0510 0.61 -0.2 598,606 + PP_0510 0.61 +0.2 598,606 + PP_0510 0.61 +0.4 598,607 - PP_0510 0.61 +0.2 598,607 - PP_0510 0.61 -1.1 598,607 - PP_0510 0.61 +0.1 598,607 - PP_0510 0.61 -1.0 598,607 - PP_0510 0.61 +0.1
Or see this region's nucleotide sequence