Strain Fitness in Pseudomonas putida KT2440 around PP_5658

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
4,643,999	-		PP_4108	0.69	-0.5
4,644,109	+		PP_4108	0.78	-0.3
4,644,110	-		PP_4108	0.78	+1.0
4,644,142	+		PP_4108	0.81	-0.8
4,644,142	+		PP_4108	0.81	-0.1
4,644,143	-		PP_4108	0.81	+0.8
4,644,389	+				-0.9
4,644,390	-				+0.4
4,644,482	+		PP_4109	0.31	+0.2
4,644,483	-		PP_4109	0.31	-0.1
4,644,483	-		PP_4109	0.31	-0.6
4,644,671	+				-0.8
4,644,671	+				-0.7
4,644,672	-				-0.4
4,644,672	-				+0.2
4,644,678	-				+0.2
4,644,678	-				+0.3
4,644,712	+				+0.6
4,644,712	+				-0.5
4,644,712	+				-1.4
4,644,712	+				-0.7
4,644,712	+				+0.2
4,644,712	+				-2.3
4,644,712	+				-2.8
4,644,713	-				-0.7
4,644,713	-				+1.6
4,644,713	-				-0.7
4,644,713	-				-0.4
4,644,714	+				+0.1
4,644,714	+				-0.3
4,644,715	-				+1.0
4,644,715	-				-1.9
4,644,730	+				+0.5
4,644,731	-				+0.8
4,644,731	-				+1.0
4,644,731	-				-0.1
4,644,895	-				+1.0
4,645,070	+		PP_5658	0.39	+1.5
4,645,071	-		PP_5658	0.40	-0.3
4,645,071	-		PP_5658	0.40	+0.4
4,645,093	+		PP_5658	0.44	+0.6
4,645,399	-				+1.7
4,645,427	+				+0.1
4,645,428	-				+0.6
4,645,428	-				+0.0
4,645,463	+				-0.7
4,645,464	-				+0.3
4,645,471	+				+0.2
4,645,471	+				+0.7
4,645,532	+				+1.3
4,645,532	+				-0.1
4,645,532	+				-1.0
4,645,533	-				+0.6
4,645,682	+		PP_4111	0.12	-0.5
4,645,682	+		PP_4111	0.12	+0.4
4,645,683	-		PP_4111	0.12	-2.3
4,645,835	+		PP_4111	0.19	+1.1
4,645,835	+		PP_4111	0.19	+1.5
4,645,835	+		PP_4111	0.19	+0.1
4,645,835	+		PP_4111	0.19	-2.1
4,645,836	-		PP_4111	0.19	+1.0
4,645,836	-		PP_4111	0.19	-1.1
4,645,836	-		PP_4111	0.19	-0.6
4,645,856	+		PP_4111	0.20	-0.6
4,645,856	+		PP_4111	0.20	-0.6
4,645,857	-		PP_4111	0.20	-1.3
4,646,012	+		PP_4111	0.27	-0.8
4,646,013	-		PP_4111	0.27	+0.3
4,646,013	-		PP_4111	0.27	-1.3