Strain Fitness in Pseudomonas putida KT2440 around PP_5609

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
4,139,503	+		PP_3644	0.42	-0.7
4,139,525	-		PP_3644	0.44	+1.1
4,139,525	-		PP_3644	0.44	+0.5
4,139,824	+		PP_3644	0.73	-0.3
4,139,825	-		PP_3644	0.73	+1.1
4,139,825	-		PP_3644	0.73	+0.5
4,139,836	+		PP_3644	0.74	+0.6
4,139,989	+		PP_3644	0.88	+0.9
4,139,989	+		PP_3644	0.88	-1.5
4,139,989	+		PP_3644	0.88	-0.4
4,139,989	+		PP_3644	0.88	-0.1
4,139,989	+		PP_3644	0.88	-0.5
4,139,989	+		PP_3644	0.88	-0.5
4,139,990	-		PP_3644	0.89	-0.2
4,139,990	-		PP_3644	0.89	+1.1
4,139,993	-		PP_3644	0.89	-1.5
4,140,403	+				+0.1
4,140,404	-				+0.0
4,140,404	-				-1.3
4,140,404	-				+0.1
4,140,404	-				-0.1
4,140,614	-		PP_5609	0.40	+0.7
4,140,618	+		PP_5609	0.41	+1.8
4,140,711	-				+1.8
4,140,815	-		PP_5609	0.74	-1.9
4,140,815	-		PP_5609	0.74	+0.7
4,140,922	+				+0.2
4,140,922	+				+0.5
4,140,923	-				+1.8
4,140,923	-				+1.5
4,140,923	-				-1.0
4,141,081	-				-0.3
4,141,194	+		PP_3645	0.19	+0.0
4,141,194	+		PP_3645	0.19	+0.5
4,141,194	+		PP_3645	0.19	-1.5
4,141,254	+		PP_3645	0.26	+0.6
4,141,515	+		PP_3645	0.57	-0.5
4,141,516	-		PP_3645	0.57	+1.1
4,141,516	-		PP_3645	0.57	+0.2
4,141,596	+		PP_3645	0.67	-0.9
4,141,596	+		PP_3645	0.67	+0.2
4,141,623	+		PP_3645	0.70	+0.4
4,141,623	+		PP_3645	0.70	-1.2
4,141,623	+		PP_3645	0.70	+1.1
4,141,646	+		PP_3645	0.73	+0.3
4,141,769	+		PP_3645	0.88	-1.8
4,141,769	+		PP_3645	0.88	+0.8
4,141,769	+		PP_3645	0.88	-0.6
4,141,769	+		PP_3645	0.88	-1.4
4,141,769	+		PP_3645	0.88	-0.2
4,141,770	-		PP_3645	0.88	+1.1
4,141,770	-		PP_3645	0.88	+0.1