Strain Fitness in Pseudomonas putida KT2440 around PP_5204

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
5,934,619	-		PP_5202	0.88	-0.0
5,934,642	+				-0.9
5,934,665	-				+0.4
5,934,702	+				+1.0
5,934,703	-				-0.5
5,934,703	-				-0.5
5,934,826	-				-0.1
5,934,842	+				+1.0
5,934,903	+				-0.9
5,934,903	+				-0.1
5,934,904	-				-1.0
5,934,904	-				+1.0
5,934,917	-				+0.3
5,934,946	+				-2.9
5,935,014	+				+0.7
5,935,014	+				-0.4
5,935,015	-				-1.2
5,935,048	+		PP_5203	0.11	-1.3
5,935,085	+		PP_5203	0.17	-1.7
5,935,140	-		PP_5203	0.26	-1.6
5,935,211	+		PP_5203	0.38	-0.8
5,935,211	+		PP_5203	0.38	-1.7
5,935,212	-		PP_5203	0.38	+1.6
5,935,212	-		PP_5203	0.38	-0.2
5,935,300	+		PP_5203	0.53	-0.5
5,935,366	-		PP_5203	0.63	-0.2
5,935,421	+		PP_5203	0.72	+2.2
5,935,421	+		PP_5203	0.72	-0.7
5,935,421	+		PP_5203	0.72	+0.3
5,935,421	+		PP_5203	0.72	-1.3
5,935,422	-		PP_5203	0.73	-0.4
5,935,422	-		PP_5203	0.73	+0.8
5,935,422	-		PP_5203	0.73	-3.2
5,935,422	-		PP_5203	0.73	-0.2
5,935,439	+		PP_5203	0.75	-1.1
5,935,440	-		PP_5203	0.76	-2.7
5,935,440	-		PP_5203	0.76	-1.2
5,935,572	-				-0.8
5,935,607	-				-1.9
5,935,645	+		PP_5204	0.12	+2.1
5,935,646	-		PP_5204	0.13	-0.3
5,935,646	-		PP_5204	0.13	+0.7
5,935,691	+		PP_5204	0.28	+1.7
5,935,749	-		PP_5204	0.47	+1.6
5,935,791	+		PP_5204	0.62	-2.3
5,935,791	+		PP_5204	0.62	+0.3
5,935,831	-		PP_5204	0.75	+0.3
5,935,910	+				+0.3
5,935,911	-				-0.5
5,936,032	+		PP_5205	0.21	-1.3
5,936,032	+		PP_5205	0.21	-0.3
5,936,032	+		PP_5205	0.21	+0.0
5,936,032	+		PP_5205	0.21	+0.1
5,936,033	-		PP_5205	0.21	+1.0
5,936,033	-		PP_5205	0.21	-1.4
5,936,033	-		PP_5205	0.21	+0.2
5,936,033	-		PP_5205	0.21	+0.9
5,936,086	+		PP_5205	0.33	-3.0
5,936,087	-		PP_5205	0.33	-0.3
5,936,183	-		PP_5205	0.54	-0.4
5,936,243	+		PP_5205	0.68	+0.0
5,936,243	+		PP_5205	0.68	-1.0
5,936,243	+		PP_5205	0.68	-1.7
5,936,243	+		PP_5205	0.68	-1.6
5,936,244	-		PP_5205	0.68	-2.6
5,936,244	-		PP_5205	0.68	-0.5
5,936,391	-				+2.1
5,936,398	+				-0.7
5,936,399	-				-0.6
5,936,501	+				+0.3
5,936,557	-				-1.0
5,936,707	+		PP_5206	0.23	-0.7
5,936,787	+		PP_5206	0.32	-1.3