Strain Fitness in Pseudomonas putida KT2440 around PP_4435

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
5,031,510	-		PP_4434	0.23	-1.8
5,031,510	-		PP_4434	0.23	-0.8
5,031,590	-		PP_4434	0.29	+0.5
5,031,592	-		PP_4434	0.29	-0.5
5,031,620	-		PP_4434	0.32	-0.4
5,031,670	-		PP_4434	0.35	-0.3
5,031,765	+		PP_4434	0.43	-0.1
5,031,765	+		PP_4434	0.43	+0.5
5,031,766	-		PP_4434	0.43	+0.2
5,031,766	-		PP_4434	0.43	+1.0
5,031,875	-		PP_4434	0.51	-0.3
5,031,942	+		PP_4434	0.56	+1.2
5,031,974	+		PP_4434	0.59	+0.3
5,031,986	-		PP_4434	0.60	-1.0
5,031,991	-		PP_4434	0.60	+0.9
5,032,015	+		PP_4434	0.62	+0.6
5,032,015	+		PP_4434	0.62	-1.0
5,032,016	-		PP_4434	0.62	-0.6
5,032,034	+		PP_4434	0.64	+0.4
5,032,035	-		PP_4434	0.64	+0.2
5,032,035	-		PP_4434	0.64	-0.4
5,032,067	-		PP_4434	0.66	-0.5
5,032,067	-		PP_4434	0.66	-1.1
5,032,100	+		PP_4434	0.69	-1.9
5,032,101	-		PP_4434	0.69	-1.3
5,032,158	+		PP_4434	0.73	-0.6
5,032,158	+		PP_4434	0.73	-2.1
5,032,158	+		PP_4434	0.73	+0.7
5,032,216	-		PP_4434	0.78	+0.1
5,032,255	+		PP_4434	0.81	-0.0
5,032,294	+		PP_4434	0.84	-0.2
5,032,305	+		PP_4434	0.84	-2.1
5,032,305	+		PP_4434	0.84	-0.1
5,032,305	+		PP_4434	0.84	-0.4
5,032,306	-		PP_4434	0.84	-1.0
5,032,309	+		PP_4434	0.85	-0.3
5,032,357	-		PP_4434	0.88	-1.2
5,032,357	-		PP_4434	0.88	-0.6
5,032,445	-				-0.2
5,032,445	-				+0.3
5,032,445	-				+0.3
5,032,445	-				-0.8
5,032,455	-				-0.1
5,032,506	-				-0.1
5,032,508	+				+0.1
5,032,509	-				+1.4
5,032,509	-				+1.2
5,032,529	+		PP_4435	0.13	-2.7
5,032,530	-		PP_4435	0.14	-1.6
5,032,676	+		PP_4435	0.55	+0.2
5,032,676	+		PP_4435	0.55	+1.0
5,032,676	+		PP_4435	0.55	-0.4
5,032,677	-		PP_4435	0.55	-0.2
5,032,677	-		PP_4435	0.55	+0.4
5,032,677	-		PP_4435	0.55	-0.5
5,032,680	+		PP_4435	0.56	+2.2
5,032,681	-		PP_4435	0.56	+0.9
5,032,782	-		PP_4435	0.85	+0.9
5,032,782	-		PP_4435	0.85	-0.3
5,032,840	+				-0.4
5,032,840	+				+0.0
5,032,840	+				-0.9
5,032,841	-				-1.7
5,032,864	-				+0.7
5,032,875	+				-0.2
5,032,876	-				+1.0
5,032,907	-				-0.8
5,032,952	+				-0.0
5,032,953	-				+0.5
5,032,979	+				+1.4
5,032,979	+				-1.3
5,033,147	-				-1.8
5,033,184	-				+0.6