Strain Fitness in Pseudomonas putida KT2440 around PP_3864

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
4,386,574	+		PP_3863	0.14	+0.2
4,386,575	-		PP_3863	0.14	+0.6
4,386,575	-		PP_3863	0.14	-0.5
4,386,575	-		PP_3863	0.14	+1.7
4,386,575	-		PP_3863	0.14	-0.1
4,386,691	+		PP_3863	0.25	-0.7
4,386,691	+		PP_3863	0.25	+1.1
4,386,692	-		PP_3863	0.25	+0.1
4,387,289	-		PP_3863	0.79	-1.6
4,387,313	-		PP_3863	0.81	-0.6
4,387,511	+				-0.4
4,387,532	-				+0.5
4,387,589	+				-1.0
4,387,589	+				+0.4
4,387,676	-		PP_3864	0.12	+0.4
4,387,676	-		PP_3864	0.12	-0.5
4,388,269	+		PP_3864	0.59	+0.9
4,388,539	-		PP_3864	0.80	-0.5
4,388,616	-		PP_3864	0.86	+1.4
4,388,616	-		PP_3864	0.86	+0.7
4,388,632	+		PP_3864	0.87	-1.5
4,388,632	+		PP_3864	0.87	+2.0
4,388,687	-				-0.6
4,388,792	+				+0.4
4,388,792	+				+0.2
4,388,792	+				+0.3
4,388,793	-				+2.0
4,388,793	-				+1.0
4,388,793	-				-2.4
4,388,793	-				-0.8
4,388,956	+				-0.7
4,388,956	+				-1.5
4,388,956	+				+0.1
4,388,956	+				+0.6
4,388,957	-				+0.3
4,389,221	-		PP_3865	0.22	+0.4
4,389,221	-		PP_3865	0.22	+0.7
4,389,221	-		PP_3865	0.22	+0.2
4,389,221	-		PP_3865	0.22	+0.4
4,389,359	+		PP_3865	0.29	-0.4
4,389,359	+		PP_3865	0.29	+0.3
4,389,687	+		PP_3865	0.46	+0.0
4,389,721	-		PP_3865	0.48	-0.9
4,389,746	+		PP_3865	0.49	+0.3
4,389,746	+		PP_3865	0.49	+0.3
4,389,746	+		PP_3865	0.49	+0.7
4,389,747	-		PP_3865	0.49	-0.0
4,389,747	-		PP_3865	0.49	+0.2
4,389,747	-		PP_3865	0.49	+0.2