Strain Fitness in Pseudomonas putida KT2440 around PP_3095

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
3,487,787	+		PP_3093	0.83	-0.1
3,488,026	-				-0.7
3,488,187	+		PP_3094	0.25	+0.6
3,488,188	-		PP_3094	0.25	-0.0
3,488,261	+		PP_3094	0.35	-1.6
3,488,262	-		PP_3094	0.35	-0.4
3,488,347	+		PP_3094	0.47	+0.2
3,488,956	+				-0.4
3,488,956	+				-1.1
3,488,957	-				-0.4
3,488,957	-				+1.6
3,489,394	+		PP_3095	0.24	+0.2
3,489,818	+		PP_3095	0.40	-0.8
3,490,147	+		PP_3095	0.53	+1.0
3,490,147	+		PP_3095	0.53	+0.6
3,490,148	-		PP_3095	0.53	+0.6
3,490,164	+		PP_3095	0.53	+0.4
3,490,322	-		PP_3095	0.59	+0.1
3,490,330	+		PP_3095	0.60	+1.2
3,490,343	+		PP_3095	0.60	+0.1
3,490,343	+		PP_3095	0.60	+0.4
3,490,343	+		PP_3095	0.60	+0.4
3,490,552	-		PP_3095	0.68	+0.8
3,490,782	-		PP_3095	0.77	-0.2
3,491,117	+		PP_3095	0.90	-0.0
3,491,182	+				-0.0
3,491,183	-				-0.9
3,491,261	-				+0.7
3,491,261	-				-0.3
3,491,261	-				-0.7
3,491,261	-				-0.1
3,491,367	+				+0.3
3,491,531	+		PP_3096	0.17	-0.0
3,491,531	+		PP_3096	0.17	-1.2
3,491,531	+		PP_3096	0.17	-0.5
3,491,531	+		PP_3096	0.17	-0.3
3,491,531	+		PP_3096	0.17	+0.1
3,491,532	-		PP_3096	0.17	-0.4
3,491,532	-		PP_3096	0.17	+1.9
3,491,532	-		PP_3096	0.17	-0.5
3,491,532	-		PP_3096	0.17	-0.2
3,491,533	+		PP_3096	0.17	-0.1
3,491,533	+		PP_3096	0.17	-0.4
3,491,535	+		PP_3096	0.17	-2.0
3,491,535	+		PP_3096	0.17	-0.4
3,491,535	+		PP_3096	0.17	+2.0
3,491,535	+		PP_3096	0.17	-0.1
3,491,536	-		PP_3096	0.18	-0.0
3,491,536	-		PP_3096	0.18	+0.6
3,491,756	+		PP_3096	0.38	+0.1
3,491,757	-		PP_3096	0.38	-0.6
3,491,778	+		PP_3096	0.40	-1.2
3,491,778	+		PP_3096	0.40	-0.4
3,491,778	+		PP_3096	0.40	+0.8
3,491,779	-		PP_3096	0.40	+0.1
3,492,100	-		PP_3096	0.70	+0.8