Strain Fitness in Pseudomonas putida KT2440 around PP_2118

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
2,416,466	-				-1.1
2,416,466	-				+0.2
2,416,493	+				+0.5
2,416,493	+				+1.0
2,416,503	+				+0.2
2,416,503	+				+0.0
2,416,504	-				+0.3
2,416,595	-				-0.2
2,416,696	+		PP_2118	0.58	+0.6
2,416,697	-		PP_2118	0.58	+0.7
2,416,697	-		PP_2118	0.58	+0.1
2,416,868	+				+0.1
2,416,869	-				-0.3
2,416,869	-				+1.8
2,416,869	-				-0.0
2,416,877	+				+0.5
2,416,890	+				-0.1
2,416,890	+				+0.5
2,416,892	+				-1.6
2,416,892	+				-0.0
2,416,931	-				+1.7
2,417,208	+		PP_2119	0.14	-0.1
2,417,209	-		PP_2119	0.14	-0.9
2,417,224	+		PP_2119	0.15	+0.0
2,417,439	-		PP_2119	0.27	-0.1
2,417,439	-		PP_2119	0.27	-0.1
2,417,581	+		PP_2119	0.35	-0.1
2,417,581	+		PP_2119	0.35	-0.2
2,417,581	+		PP_2119	0.35	+0.1
2,417,582	-		PP_2119	0.35	+0.9
2,417,582	-		PP_2119	0.35	+0.2
2,417,582	-		PP_2119	0.35	+0.7
2,417,623	+		PP_2119	0.37	+1.8
2,417,623	+		PP_2119	0.37	+0.7
2,417,624	-		PP_2119	0.37	+0.1
2,417,624	-		PP_2119	0.37	-0.3
2,417,624	-		PP_2119	0.37	+0.3
2,417,624	-		PP_2119	0.37	+0.7
2,417,679	+		PP_2119	0.40	+0.2
2,417,679	+		PP_2119	0.40	-0.7
2,417,679	+				+0.7
2,417,680	-		PP_2119	0.40	+0.3
2,417,700	+		PP_2119	0.42	+1.7
2,417,700	+		PP_2119	0.42	+0.4
2,417,701	-		PP_2119	0.42	-0.3