Strain Fitness in Pseudomonas putida KT2440 around PP_1632

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
1,829,309	-		PP_1631	0.29	+0.5
1,829,386	+		PP_1631	0.36	+0.8
1,829,387	-		PP_1631	0.36	+1.5
1,829,461	-		PP_1631	0.43	+1.0
1,829,461	-		PP_1631	0.43	-0.1
1,829,461	-		PP_1631	0.43	-0.3
1,829,508	+		PP_1631	0.47	-1.3
1,829,664	+		PP_1631	0.61	+0.4
1,829,664	+		PP_1631	0.61	-1.5
1,829,664	+		PP_1631	0.61	-1.2
1,829,800	+		PP_1631	0.73	+1.0
1,829,800	+		PP_1631	0.73	-0.8
1,829,801	-		PP_1631	0.73	-2.1
1,829,801	-		PP_1631	0.73	+0.0
1,829,801	-		PP_1631	0.73	-0.3
1,829,863	+		PP_1631	0.79	-1.1
1,830,095	-				+2.0
1,830,095	-				+0.4
1,830,095	-				+0.7
1,830,124	+				+0.6
1,830,125	-				-0.1
1,830,141	+				-2.1
1,830,142	-				+0.3
1,830,229	-				-0.3
1,830,280	+				+0.1
1,830,299	-		PP_1632	0.18	-1.2
1,830,299	-		PP_1632	0.18	+0.7
1,830,487	+				+1.0
1,830,487	+				-0.2
1,830,488	-				-0.3
1,830,488	-				-0.1
1,830,559	+		PP_1633	0.17	+0.8
1,830,574	+		PP_1633	0.21	-1.3
1,830,574	+		PP_1633	0.21	+0.7
1,830,575	-		PP_1633	0.21	-0.3
1,830,696	+		PP_1633	0.50	+0.3
1,830,737	-		PP_1633	0.60	-0.5
1,830,826	+		PP_1633	0.81	+0.5
1,830,827	-		PP_1633	0.81	+0.3
1,830,893	+				-0.1
1,830,993	+				+0.8
1,831,005	+				-0.6
1,831,006	-				-0.5
1,831,007	+				-0.4
1,831,007	+				-0.7
1,831,007	+				+0.1
1,831,007	+				-0.4
1,831,007	+				+1.2
1,831,008	-				-0.8
1,831,008	-				-0.9
1,831,008	-				-0.7
1,831,259	+		PP_1634	0.19	+1.1
1,831,259	+		PP_1634	0.19	-1.6
1,831,260	-		PP_1634	0.19	+0.6
1,831,437	+		PP_1634	0.44	-0.8
1,831,437	+		PP_1634	0.44	-0.8
1,831,437	+		PP_1634	0.44	-0.0
1,831,438	-		PP_1634	0.44	-0.0
1,831,438	-				+0.4
1,831,438	-		PP_1634	0.44	+0.7
1,831,438	-		PP_1634	0.44	+0.1
1,831,440	-		PP_1634	0.45	+0.2
1,831,440	-		PP_1634	0.45	-2.3