Strain Fitness in Pseudomonas putida KT2440 around PP_1269

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
1,449,111	+				+1.1
1,449,112	-				-0.9
1,449,112	-				-1.1
1,449,120	-				-0.3
1,449,199	+				-0.4
1,449,200	-				-0.5
1,449,200	-				+0.6
1,449,271	-		PP_1267	0.12	+0.2
1,449,296	+		PP_1267	0.18	-0.6
1,449,296	+		PP_1267	0.18	+0.4
1,449,296	+		PP_1267	0.18	-0.4
1,449,296	+		PP_1267	0.18	+1.1
1,449,297	-		PP_1267	0.18	+0.2
1,449,297	-		PP_1267	0.18	+0.1
1,449,297	-		PP_1267	0.18	+0.2
1,449,297	-		PP_1267	0.18	-0.1
1,449,297	-		PP_1267	0.18	-2.3
1,449,297	-		PP_1267	0.18	-0.3
1,449,297	-		PP_1267	0.18	+1.9
1,449,318	-		PP_1267	0.22	+0.9
1,449,464	+		PP_1267	0.53	+3.1
1,449,493	+		PP_1267	0.60	+0.5
1,449,494	-		PP_1267	0.60	+0.3
1,449,531	+		PP_1267	0.68	+0.0
1,449,532	-		PP_1267	0.68	+0.2
1,449,542	-		PP_1267	0.70	+0.7
1,449,549	+		PP_1267	0.72	-0.2
1,449,550	-		PP_1267	0.72	+0.9
1,449,550	-		PP_1267	0.72	+0.1
1,449,552	-		PP_1267	0.72	-0.7
1,449,595	+		PP_1267	0.81	+0.1
1,449,634	+		PP_1267	0.90	+2.1
1,449,634	+		PP_1267	0.90	-0.7
1,449,635	-				-0.9
1,449,635	-				+0.3
1,449,635	-				+0.8
1,449,635	-				+0.6
1,449,652	-				-0.9
1,449,868	-		PP_1268	0.49	-1.9
1,450,008	+		PP_1268	0.85	-0.5
1,450,008	+		PP_1268	0.85	+0.5
1,450,008	+		PP_1268	0.85	-0.4
1,450,009	-		PP_1268	0.85	+0.2
1,450,009	-		PP_1268	0.85	-1.1
1,450,032	-				-0.5
1,450,032	-				+0.1
1,450,079	+				-1.3
1,450,080	-				-2.3
1,450,080	-				+0.5
1,450,366	-		PP_1269	0.60	+0.6
1,450,702	+				+0.1
1,450,703	-				-0.5
1,450,703	-				+0.1
1,450,712	+				-0.5
1,450,725	+				-0.1
1,450,725	+				-1.8
1,450,726	-				-1.0
1,450,726	-				+1.6
1,450,779	+				+0.1
1,450,779	+				-0.0
1,450,780	-				-0.7
1,450,996	+		PP_1270	0.20	+0.7
1,450,996	+		PP_1270	0.20	-0.6
1,450,997	-		PP_1270	0.20	+0.4
1,451,314	+		PP_1270	0.55	+0.3
1,451,315	-		PP_1270	0.55	+0.3
1,451,319	-		PP_1270	0.55	+0.3
1,451,319	-		PP_1270	0.55	+0.1
1,451,351	-		PP_1270	0.59	+0.3
1,451,351	-		PP_1270	0.59	+1.1