Strain Fitness in Pseudomonas putida KT2440 around PP_1053

Experiment: MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL
1,201,275	+		PP_1051	0.20	-0.4
1,201,320	+		PP_1051	0.31	-0.3
1,201,321	-		PP_1051	0.31	+1.1
1,201,418	+		PP_1051	0.55	-0.4
1,201,419	-		PP_1051	0.55	-0.4
1,201,574	+				-1.0
1,201,575	-				+0.5
1,201,575	-				-0.5
1,201,575	-				-0.6
1,201,575	-				+1.4
1,201,984	+		PP_1052	0.65	+0.4
1,202,149	+				-0.1
1,202,149	+				-2.1
1,202,149	+				+0.7
1,202,150	-				+2.1
1,202,150	-				-0.1
1,202,208	-				+0.5
1,202,560	+		PP_1053	0.36	+0.9
1,202,646	+		PP_1053	0.44	-1.0
1,202,647	-				-0.2
1,202,771	-		PP_1053	0.55	+1.7
1,203,023	-		PP_1053	0.78	-0.7
1,203,023	-		PP_1053	0.78	+0.4
1,203,041	+		PP_1053	0.80	-1.9
1,203,041	+		PP_1053	0.80	-0.9
1,203,042	-		PP_1053	0.80	+0.3
1,203,042	-		PP_1053	0.80	+0.5
1,203,053	-		PP_1053	0.81	-0.5
1,203,185	+				+0.5
1,203,438	+		PP_1054	0.47	-0.7
1,203,438	+		PP_1054	0.47	-1.0
1,203,439	-		PP_1054	0.47	-2.8
1,203,671	+				+0.8
1,203,671	+				-2.0
1,203,671	+				-2.3
1,204,050	-		PP_1055	0.61	+2.1
1,204,050	-		PP_1055	0.61	+1.0