Strain Fitness in Pseudomonas putida KT2440 around PP_5594

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
3,684,390	+		PP_3250	0.53	-0.6
3,684,411	+		PP_3250	0.55	-0.7
3,684,462	-		PP_3250	0.59	+0.9
3,684,478	+		PP_3250	0.60	-0.3
3,684,478	+		PP_3250	0.60	+0.1
3,684,479	-		PP_3250	0.60	-0.2
3,684,479	-		PP_3250	0.60	+1.7
3,684,639	+		PP_3250	0.73	+0.1
3,684,725	+		PP_3250	0.79	-0.1
3,684,726	-		PP_3250	0.80	-0.3
3,684,819	-		PP_3250	0.87	+0.3
3,685,003	-				-0.2
3,685,018	-				+0.5
3,685,022	-				+1.1
3,685,046	+				-0.8
3,685,090	-				+0.7
3,685,120	-				-0.0
3,685,120	-				-0.0
3,685,145	-				-0.5
3,685,145	-				-1.6
3,685,316	+				-0.1
3,685,317	-				-1.7
3,685,478	+		PP_5594	0.51	-2.8
3,685,479	-		PP_5594	0.52	-2.5
3,685,592	+				+0.2
3,685,613	+				-0.5
3,685,613	+				+0.5
3,685,665	+				+0.4
3,685,665	+				+0.1
3,685,796	+		PP_3251	0.15	+0.7
3,685,797	-		PP_3251	0.15	+0.2
3,685,850	+		PP_3251	0.19	+0.4
3,685,851	-		PP_3251	0.19	+0.5
3,685,851	-		PP_3251	0.19	+0.1
3,685,914	-		PP_3251	0.24	+0.5
3,685,939	+		PP_3251	0.26	-1.5
3,686,046	+		PP_3251	0.34	-2.2
3,686,078	-		PP_3251	0.36	-0.1
3,686,078	-		PP_3251	0.36	-1.1
3,686,106	+		PP_3251	0.39	+0.9
3,686,175	+		PP_3251	0.44	+0.7
3,686,175	+		PP_3251	0.44	-0.6
3,686,175	+		PP_3251	0.44	-1.3
3,686,176	-		PP_3251	0.44	+0.1
3,686,176	-		PP_3251	0.44	-0.3
3,686,188	-		PP_3251	0.45	-0.1
3,686,224	-		PP_3251	0.47	-0.3
3,686,224	-		PP_3251	0.47	-0.1
3,686,333	-		PP_3251	0.56	+0.2
3,686,361	+		PP_3251	0.58	-1.3
3,686,361	+		PP_3251	0.58	-1.1
3,686,378	-		PP_3251	0.59	-1.5
3,686,479	-		PP_3251	0.67	+0.3
3,686,479	-		PP_3251	0.67	-2.5