Strain Fitness in Pseudomonas putida KT2440 around PP_1649

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
1,840,192	-		PP_1647	0.20	-2.1
1,840,340	-		PP_1647	0.55	+2.0
1,840,381	+		PP_1647	0.64	-0.4
1,840,382	-		PP_1647	0.64	+0.6
1,840,420	+		PP_1647	0.73	-2.4
1,840,421	-		PP_1647	0.73	+0.7
1,840,421	-		PP_1647	0.73	-0.7
1,840,921	-				+1.9
1,840,969	+				-0.2
1,840,970	-				-0.6
1,840,976	-				-1.9
1,841,186	-		PP_1649	0.21	-2.2
1,841,382	+		PP_1649	0.40	-1.8
1,841,447	-		PP_1649	0.46	-1.2
1,841,593	+		PP_1649	0.60	+0.4
1,841,728	+		PP_1649	0.73	-2.0
1,841,933	-				-0.6
1,842,163	+				-2.5
1,842,164	-				-2.7
1,842,183	-				-2.1
1,842,183	-				-2.0
1,842,208	+				-2.1
1,842,208	+				-1.8
1,842,208	+				-2.5
1,842,209	-				-2.4
1,842,209	-				-2.1
1,842,256	+				-3.9
1,842,256	+				-2.0
1,842,362	-		PP_1650	0.12	-3.5
1,842,486	-		PP_1650	0.16	-3.1
1,842,682	+		PP_1650	0.23	-2.0
1,842,683	-		PP_1650	0.23	-2.1
1,842,712	+		PP_1650	0.24	-3.4
1,842,745	+		PP_1650	0.26	-3.4
1,842,923	+		PP_1650	0.32	-1.8
1,842,923	+		PP_1650	0.32	-2.0
1,842,923	+		PP_1650	0.32	-2.1
1,842,933	-		PP_1650	0.32	-2.3
1,842,965	-		PP_1650	0.34	-2.9
1,842,965	-		PP_1650	0.34	-3.1
1,843,001	+		PP_1650	0.35	-2.2
1,843,001	+		PP_1650	0.35	-1.9
1,843,002	-		PP_1650	0.35	-1.9