Strain Fitness in Pseudomonas putida KT2440 around PP_1344
Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL |
---|---|---|---|---|---|
remove | |||||
1,530,251 | + | -1.6 | |||
1,531,196 | + | +0.0 | |||
1,531,196 | + | -0.6 | |||
1,531,196 | + | -0.5 | |||
1,531,213 | + | -0.5 | |||
1,531,213 | + | -0.6 | |||
1,531,213 | + | -0.5 | |||
1,531,214 | - | +1.1 | |||
1,531,214 | - | -3.2 | |||
1,531,214 | - | +0.5 | |||
1,531,222 | - | -0.6 | |||
1,531,695 | - | PP_1344 | 0.71 | -1.8 | |
1,531,695 | - | PP_1344 | 0.71 | +0.5 | |
1,531,734 | + | PP_1344 | 0.77 | -0.7 | |
1,531,804 | + | PP_1344 | 0.89 | -2.0 | |
1,531,909 | + | +0.4 | |||
1,531,939 | + | +2.1 |
Or see this region's nucleotide sequence