Strain Fitness in Pseudomonas putida KT2440 around PP_4834

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
5,499,940	+				+1.0
5,499,974	+				+0.6
5,499,974	+				-0.7
5,499,974	+				-0.1
5,500,035	-				+0.3
5,500,071	-				+1.2
5,500,151	-		PP_4833	0.17	-0.8
5,500,151	-		PP_4833	0.17	-1.5
5,500,187	+		PP_4833	0.25	+0.5
5,500,187	+		PP_4833	0.25	-0.6
5,500,187	+		PP_4833	0.25	+0.4
5,500,241	-		PP_4833	0.38	-0.6
5,500,517	+				-0.5
5,500,518	-				-0.3
5,500,691	+		PP_4834	0.18	+0.5
5,500,691	+		PP_4834	0.18	+0.3
5,500,691	+		PP_4834	0.18	+0.9
5,500,812	+		PP_4834	0.32	+1.4
5,500,813	-		PP_4834	0.33	+0.5
5,500,813	-		PP_4834	0.33	-0.7
5,500,813	-		PP_4834	0.33	-0.6
5,500,835	+		PP_4834	0.35	-0.1
5,500,835	+		PP_4834	0.35	+0.9
5,500,835	+		PP_4834	0.35	+0.7
5,500,835	+		PP_4834	0.35	+0.9
5,500,835	+		PP_4834	0.35	+0.1
5,500,835	+		PP_4834	0.35	+0.5
5,500,835	+		PP_4834	0.35	+1.1
5,500,836	-		PP_4834	0.35	+0.9
5,500,836	-		PP_4834	0.35	+0.6
5,500,836	-		PP_4834	0.35	+0.3
5,500,836	-		PP_4834	0.35	+0.4
5,501,261	+		PP_4834	0.85	+2.4
5,501,261	+		PP_4834	0.85	+1.1
5,501,261	+		PP_4834	0.85	-0.5
5,501,261	+		PP_4834	0.85	-0.7
5,501,262	-		PP_4834	0.85	-0.4
5,501,262	-		PP_4834	0.85	+0.3
5,501,262	-		PP_4834	0.85	+0.6
5,501,262	-		PP_4834	0.85	-0.1
5,501,265	+		PP_4834	0.85	+0.1
5,501,265	+		PP_4834	0.85	+0.1
5,501,279	+		PP_4834	0.87	+1.3
5,501,279	+		PP_4834	0.87	+0.6
5,501,280	-		PP_4834	0.87	-0.2
5,501,280	-		PP_4834	0.87	-0.3
5,501,280	-		PP_4834	0.87	+1.9
5,501,280	-		PP_4834	0.87	-0.5
5,501,448	+				-0.4
5,501,515	+				-0.6
5,501,556	+				-1.5
5,501,560	+				-0.3
5,501,560	+				-0.9
5,501,560	+				+0.9
5,501,560	+				+0.8
5,501,561	-				-0.6
5,501,561	-				-0.1
5,501,563	-				-0.2
5,501,563	-				-0.7
5,501,572	+				-0.1
5,501,573	-				+1.4
5,501,578	-				+0.7
5,501,578	-				+0.7
5,501,578	-				-0.2
5,501,935	+		PP_4835	0.84	-0.0
5,501,936	-		PP_4835	0.84	+0.9
5,501,936	-		PP_4835	0.84	-0.0
5,501,969	+				-1.0
5,501,991	-				-1.1
5,502,111	+		PP_4836	0.14	-0.5
5,502,112	-		PP_4836	0.14	+0.8
5,502,186	+		PP_4836	0.29	+0.3
5,502,193	-		PP_4836	0.30	+0.6
5,502,366	+		PP_4836	0.66	+0.4
5,502,367	-		PP_4836	0.66	+1.4