Strain Fitness in Pseudomonas putida KT2440 around PP_4525

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
5,139,698	+		PP_4524	0.57	-0.2
5,139,698	+		PP_4524	0.57	+0.6
5,139,698	+		PP_4524	0.57	+0.7
5,139,698	+		PP_4524	0.57	-0.9
5,139,699	-		PP_4524	0.57	-0.4
5,139,699	-		PP_4524	0.57	+0.8
5,139,710	+		PP_4524	0.58	+0.6
5,139,710	+		PP_4524	0.58	+0.0
5,139,710	+		PP_4524	0.58	-0.6
5,140,046	+		PP_4524	0.82	-0.8
5,140,046	+		PP_4524	0.82	+0.6
5,140,047	-		PP_4524	0.82	-1.4
5,140,048	+		PP_4524	0.83	+1.5
5,140,048	+		PP_4524	0.83	-1.4
5,140,202	+				+0.7
5,140,206	-				+2.2
5,140,206	-				+0.3
5,140,218	+				+1.1
5,140,313	+				-0.1
5,140,352	+				-2.1
5,140,544	-				-0.5
5,140,544	-				+1.8
5,140,544	-				-1.1
5,140,606	-				-0.2
5,140,620	+				-1.1
5,140,624	-				-0.4
5,140,647	+				-0.2
5,140,648	-				+0.6
5,140,648	-				-0.9
5,140,755	-				-1.2
5,140,910	-		PP_4525	0.27	-1.9
5,140,944	-		PP_4525	0.31	+1.1
5,141,070	+		PP_4525	0.45	+0.1
5,141,070	+		PP_4525	0.45	+0.1
5,141,219	-		PP_4525	0.62	+0.2
5,141,219	-		PP_4525	0.62	+1.6
5,141,231	-		PP_4525	0.63	+0.4
5,141,272	+		PP_4525	0.68	+2.1
5,141,272	+		PP_4525	0.68	+0.5
5,141,272	+		PP_4525	0.68	+0.2
5,141,272	+		PP_4525	0.68	-1.9
5,141,272	+		PP_4525	0.68	-0.6
5,141,272	+		PP_4525	0.68	+0.3
5,141,272	+		PP_4525	0.68	-0.2
5,141,272	+		PP_4525	0.68	+1.8
5,141,272	+		PP_4525	0.68	-0.1
5,141,272	+		PP_4525	0.68	+0.4
5,141,272	+		PP_4525	0.68	+0.4
5,141,273	-		PP_4525	0.68	+0.6
5,141,351	+		PP_4525	0.76	+0.1
5,141,351	+		PP_4525	0.76	-0.1
5,141,351	+		PP_4525	0.76	+0.6
5,141,352	-				+1.2
5,141,352	-		PP_4525	0.77	+2.4
5,141,352	-		PP_4525	0.77	+0.2
5,141,352	-		PP_4525	0.77	+0.2
5,141,353	-		PP_4525	0.77	-0.1
5,141,362	+		PP_4525	0.78	+0.5
5,141,540	+				+1.2
5,141,540	+				+0.1
5,141,541	-				+1.0
5,141,541	-				+0.6
5,141,541	-				-2.0
5,141,639	-				-2.5
5,141,639	-				-0.8
5,141,816	+		PP_4526	0.13	+0.1
5,141,816	+		PP_4526	0.13	-0.5
5,141,816	+		PP_4526	0.13	+1.3
5,141,817	-		PP_4526	0.13	+0.3
5,141,817	-		PP_4526	0.13	+0.0
5,142,030	+		PP_4526	0.31	+0.2
5,142,031	-		PP_4526	0.31	+0.9
5,142,031	-		PP_4526	0.31	+0.8
5,142,069	+		PP_4526	0.34	-1.2
5,142,069	+		PP_4526	0.34	+0.1
5,142,165	-		PP_4526	0.43	-0.4
5,142,165	-		PP_4526	0.43	+0.2
5,142,171	+		PP_4526	0.43	+0.7
5,142,172	-				+0.6
5,142,172	-		PP_4526	0.43	+0.6
5,142,172	-		PP_4526	0.43	+0.2
5,142,172	-		PP_4526	0.43	+0.9
5,142,172	-		PP_4526	0.43	+0.5
5,142,299	+		PP_4526	0.54	+0.1
5,142,299	+		PP_4526	0.54	-0.8
5,142,300	-		PP_4526	0.54	+0.4
5,142,300	-		PP_4526	0.54	-0.2
5,142,300	-		PP_4526	0.54	-0.4
5,142,300	-		PP_4526	0.54	+2.0
5,142,300	-		PP_4526	0.54	-0.8
5,142,308	+		PP_4526	0.55	-0.8
5,142,308	+		PP_4526	0.55	+0.3
5,142,308	+		PP_4526	0.55	+1.5
5,142,320	+		PP_4526	0.56	+0.5
5,142,321	-		PP_4526	0.56	-1.2