Strain Fitness in Pseudomonas putida KT2440 around PP_2652

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
3,039,526	-		PP_2651	0.45	+1.5
3,039,714	+		PP_2651	0.59	-0.3
3,039,714	+		PP_2651	0.59	-0.9
3,039,715	-		PP_2651	0.59	-0.3
3,039,715	-		PP_2651	0.59	+1.5
3,039,715	-		PP_2651	0.59	-0.5
3,039,715	-		PP_2651	0.59	-2.0
3,039,715	-		PP_2651	0.59	+0.8
3,039,715	-		PP_2651	0.59	+0.6
3,039,715	-		PP_2651	0.59	-2.2
3,039,750	+		PP_2651	0.62	+0.4
3,039,810	+		PP_2651	0.67	-1.2
3,039,811	-		PP_2651	0.67	+0.1
3,040,104	+		PP_2651	0.88	-1.7
3,040,218	+				-0.5
3,040,218	+				+0.0
3,040,218	+				+0.5
3,040,218	+				-0.4
3,040,219	-				+0.9
3,040,219	-				-0.1
3,040,219	-				+0.6
3,040,356	+				+0.7
3,040,356	+				+0.9
3,040,357	-				+1.2
3,040,442	-				+0.5
3,040,442	-				+0.4
3,040,518	+		PP_2652	0.15	-0.1
3,040,518	+		PP_2652	0.15	-0.9
3,040,673	+		PP_2652	0.35	-1.1
3,040,673	+		PP_2652	0.35	-0.0
3,040,674	-		PP_2652	0.35	-1.4
3,040,674	-		PP_2652	0.35	-0.2
3,040,778	+		PP_2652	0.48	-0.4
3,040,915	+		PP_2652	0.66	-0.2
3,040,915	+		PP_2652	0.66	-0.8
3,040,915	+		PP_2652	0.66	-0.8
3,040,915	+		PP_2652	0.66	-0.7
3,040,916	-		PP_2652	0.66	+1.5
3,040,916	-		PP_2652	0.66	+0.1
3,040,916	-		PP_2652	0.66	-0.6
3,040,916	-		PP_2652	0.66	-0.0
3,040,916	-		PP_2652	0.66	+1.5
3,041,037	+				+0.5
3,041,038	-		PP_2652	0.81	-1.9
3,041,038	-		PP_2652	0.81	-1.5
3,041,174	+				+0.5
3,041,181	+				+0.0
3,041,182	-				+0.6
3,041,182	-				-0.8
3,041,330	+		PP_2653	0.19	-0.0
3,041,670	+		PP_2653	0.61	+1.9
3,041,671	-		PP_2653	0.61	-2.2
3,041,685	+		PP_2653	0.63	-1.0
3,041,686	-		PP_2653	0.63	+0.7
3,042,059	-				+0.8
3,042,064	+				+0.7
3,042,065	-				-0.3
3,042,095	+				+0.5
3,042,095	+				+1.0
3,042,095	+				+2.5
3,042,095	+				-0.5
3,042,095	+				+0.1
3,042,095	+				-0.5
3,042,096	-				-0.1
3,042,096	-				+0.2
3,042,097	+				-2.8
3,042,098	-				-1.2
3,042,126	+				-0.1
3,042,147	-		PP_5537	0.16	+1.0