Strain Fitness in Pseudomonas putida KT2440 around PP_2418

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
2,763,548	+		PP_2417	0.64	+0.1
2,763,548	+		PP_2417	0.64	-0.1
2,763,624	+		PP_2417	0.72	+0.7
2,763,727	-		PP_2417	0.82	+0.7
2,763,727	-		PP_2417	0.82	+1.5
2,764,002	+				-0.0
2,764,162	+		PP_2418	0.23	+0.5
2,764,254	-		PP_2418	0.32	+0.7
2,764,254	-		PP_2418	0.32	+0.4
2,764,254	-		PP_2418	0.32	+1.5
2,764,254	-		PP_2418	0.32	+0.8
2,764,427	+		PP_2418	0.47	+0.1
2,764,427	+		PP_2418	0.47	-0.5
2,764,428	-		PP_2418	0.48	+0.5
2,764,514	+		PP_2418	0.55	+0.5
2,764,515	-		PP_2418	0.56	+0.0
2,764,515	-		PP_2418	0.56	-0.5
2,764,515	-		PP_2418	0.56	+0.7
2,764,515	-		PP_2418	0.56	+0.4
2,764,515	-		PP_2418	0.56	+0.1
2,764,682	+		PP_2418	0.71	-1.5
2,764,682	+		PP_2418	0.71	-0.2
2,764,693	+		PP_2418	0.72	+0.2
2,764,694	-		PP_2418	0.72	-1.1
2,764,694	-		PP_2418	0.72	-0.1
2,764,748	+		PP_2418	0.77	-1.3
2,764,748	+		PP_2418	0.77	-0.3
2,764,748	+		PP_2418	0.77	-0.1
2,764,749	-		PP_2418	0.77	+0.3
2,764,882	+		PP_2418	0.89	-0.0
2,764,882	+		PP_2418	0.89	+0.6
2,764,883	-		PP_2418	0.89	-0.6
2,764,883	-		PP_2418	0.89	+0.1
2,765,040	+				+0.2
2,765,041	-				+1.0
2,765,134	+				-0.3
2,765,134	+				+0.8
2,765,134	+				-1.0
2,765,165	+				-0.4
2,765,190	+				+0.5
2,765,190	+				+0.3
2,765,223	+				-0.9
2,765,224	-				-1.9
2,765,224	-				-0.1
2,765,325	+				-1.5
2,765,326	-				+0.1
2,765,326	-				+1.2
2,765,326	-				+0.6
2,765,371	+		PP_2419	0.10	-1.3
2,765,388	+		PP_2419	0.11	+0.1
2,765,389	-		PP_2419	0.12	+0.3
2,765,430	+		PP_2419	0.15	+0.3
2,765,431	-		PP_2419	0.15	+0.5
2,765,435	+		PP_2419	0.16	+1.5
2,765,435	+		PP_2419	0.16	+0.2
2,765,435	+		PP_2419	0.16	-1.9
2,765,436	-		PP_2419	0.16	+0.2
2,765,448	+		PP_2419	0.17	+0.9
2,765,448	+		PP_2419	0.17	+1.3
2,765,448	+		PP_2419	0.17	+0.8
2,765,448	+		PP_2419	0.17	+1.0
2,765,464	-		PP_2419	0.18	+0.3
2,765,464	-		PP_2419	0.18	+1.5
2,765,724	+		PP_2419	0.40	+0.2
2,765,724	+		PP_2419	0.40	-0.5
2,765,725	-		PP_2419	0.40	+0.8
2,765,817	+		PP_2419	0.48	-1.6