Strain Fitness in Pseudomonas putida KT2440 around PP_2165

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
2,469,634	+		PP_2163	0.72	-2.0
2,469,634	+		PP_2163	0.72	-3.8
2,469,634	+		PP_2163	0.72	-3.1
2,469,634	+		PP_2163	0.72	-1.5
2,469,634	+		PP_2163	0.72	-1.1
2,469,635	-		PP_2163	0.72	-2.7
2,469,635	-		PP_2163	0.72	-2.3
2,469,647	-		PP_2163	0.74	-3.1
2,469,653	-		PP_2163	0.75	-3.6
2,469,670	-		PP_2163	0.77	-2.0
2,469,754	+		PP_2163	0.89	-3.7
2,469,754	+		PP_2163	0.89	-2.1
2,469,754	+		PP_2163	0.89	-3.4
2,469,755	-		PP_2163	0.89	-3.5
2,469,775	+				-2.6
2,469,775	+				-3.5
2,469,775	+				-0.6
2,469,987	-		PP_2164	0.40	-1.5
2,470,142	-				-2.2
2,470,206	-				+0.7
2,470,206	-				+0.1
2,470,208	-				-1.6
2,470,282	+				+0.5
2,470,282	+				-0.0
2,470,296	+				+0.1
2,470,296	+				+0.4
2,470,303	+				+0.3
2,470,303	+				+1.7
2,470,303	+				+0.7
2,470,375	+				-0.8
2,470,375	+				+0.1
2,472,099	+				+0.1
2,472,099	+				+0.1
2,472,100	-				+0.5
2,472,100	-				-0.3
2,472,100	-				-0.9
2,472,101	+				+1.0
2,472,102	-				-1.1
2,472,188	+				+0.2
2,472,188	+				-0.3
2,472,189	-				-0.9
2,472,201	-				-0.3
2,472,228	-				+0.7
2,472,246	+				-0.8
2,472,268	+				-0.6
2,472,297	+				+0.3
2,472,297	+				-0.3
2,472,453	+		PP_2167	0.11	-0.8
2,472,453	+		PP_2167	0.11	+1.3
2,472,453	+		PP_2167	0.11	-0.2
2,472,453	+		PP_2167	0.11	-0.2
2,472,453	+		PP_2167	0.11	+0.7
2,472,453	+		PP_2167	0.11	+0.1
2,472,453	+		PP_2167	0.11	-0.3
2,472,454	-		PP_2167	0.11	+0.1
2,472,454	-		PP_2167	0.11	-0.5
2,472,576	+		PP_2167	0.18	-0.9
2,472,576	+		PP_2167	0.18	+0.4
2,472,576	+		PP_2167	0.18	+0.6
2,472,577	-		PP_2167	0.18	-1.1
2,472,589	-		PP_2167	0.19	+0.8
2,472,589	-		PP_2167	0.19	-0.3
2,472,615	+		PP_2167	0.20	-1.1
2,472,616	-		PP_2167	0.20	-0.6