Strain Fitness in Pseudomonas putida KT2440 around PP_2087

Experiment: MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
2,378,354	+				-2.7
2,378,356	+				+0.3
2,378,356	+				-0.6
2,378,356	+				-0.5
2,378,356	+				-0.6
2,378,357	-				-2.7
2,378,357	-				+0.7
2,378,357	-				+0.6
2,378,357	-				-0.1
2,378,357	-				-0.8
2,378,707	-				+0.1
2,378,721	-				+0.1
2,378,721	-				-1.5
2,379,204	-		PP_2087	0.59	-1.5
2,379,204	-		PP_2087	0.59	-1.6
2,379,204	-		PP_2087	0.59	-0.9
2,379,207	-		PP_2087	0.59	+0.1
2,379,381	+		PP_2087	0.80	-1.6
2,379,382	-		PP_2087	0.80	+0.7
2,379,397	-		PP_2087	0.82	-1.9
2,379,561	+				+0.4
2,379,561	+				-1.1
2,379,566	+				-0.1
2,379,666	-				-0.7
2,379,740	+		PP_2088	0.18	+0.2
2,379,854	+		PP_2088	0.37	+0.4
2,379,854	+		PP_2088	0.37	-1.0
2,379,902	+		PP_2088	0.45	-1.9
2,379,914	+		PP_2088	0.47	-3.8
2,379,914	+		PP_2088	0.47	-0.2
2,380,169	+				-0.5
2,380,223	+				+0.1
2,380,224	-				-0.9
2,380,264	+				-1.6
2,380,309	+				+0.7
2,380,309	+				-0.6
2,380,309	+				-0.6
2,380,309	+				-1.5
2,380,309	+				-0.3
2,380,313	+				+0.1
2,380,313	+				-0.6
2,380,313	+				+0.7
2,380,514	+		PP_2089	0.17	+0.7