Experiment: Hippuric (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2702 and PP_2703 are separated by 373 nucleotides PP_2703 and PP_2704 are separated by 1 nucleotides
PP_2702: PP_2702 - putative Porin, at 3,092,955 to 3,094,085
_2702
PP_2703: PP_2703 - major facilitator transporter, at 3,094,459 to 3,095,760
_2703
PP_2704: PP_2704 - Peptidase, M20/M25/M40 family, at 3,095,762 to 3,096,946
_2704
Position (kb)
3094
3095
3096 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3093.530 kb on - strand, within PP_2702 at 3093.562 kb on + strand, within PP_2702 at 3093.598 kb on + strand, within PP_2702 at 3093.598 kb on + strand, within PP_2702 at 3093.598 kb on + strand, within PP_2702 at 3093.616 kb on + strand, within PP_2702 at 3093.616 kb on + strand, within PP_2702 at 3093.616 kb on + strand, within PP_2702 at 3093.616 kb on + strand, within PP_2702 at 3093.616 kb on + strand, within PP_2702 at 3093.617 kb on - strand, within PP_2702 at 3093.662 kb on - strand, within PP_2702 at 3093.662 kb on - strand, within PP_2702 at 3093.833 kb on - strand, within PP_2702 at 3093.904 kb on + strand, within PP_2702 at 3093.905 kb on - strand, within PP_2702 at 3093.905 kb on - strand, within PP_2702 at 3093.931 kb on + strand, within PP_2702 at 3093.971 kb on - strand, within PP_2702 at 3093.971 kb on - strand, within PP_2702 at 3094.070 kb on + strand at 3094.071 kb on - strand at 3094.158 kb on + strand at 3094.158 kb on + strand at 3094.381 kb on - strand at 3094.399 kb on + strand at 3094.422 kb on - strand at 3094.576 kb on + strand at 3094.577 kb on - strand at 3094.591 kb on + strand, within PP_2703 at 3094.607 kb on + strand, within PP_2703 at 3094.607 kb on + strand, within PP_2703 at 3094.910 kb on + strand, within PP_2703 at 3094.911 kb on - strand, within PP_2703 at 3094.981 kb on + strand, within PP_2703 at 3095.107 kb on + strand, within PP_2703 at 3095.108 kb on - strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.111 kb on + strand, within PP_2703 at 3095.112 kb on - strand, within PP_2703 at 3095.155 kb on - strand, within PP_2703 at 3095.240 kb on - strand, within PP_2703 at 3095.254 kb on + strand, within PP_2703 at 3095.266 kb on + strand, within PP_2703 at 3095.267 kb on - strand, within PP_2703 at 3095.267 kb on - strand, within PP_2703 at 3095.287 kb on + strand, within PP_2703 at 3095.326 kb on - strand, within PP_2703 at 3095.378 kb on - strand, within PP_2703 at 3095.378 kb on - strand, within PP_2703 at 3095.378 kb on - strand, within PP_2703 at 3095.446 kb on + strand, within PP_2703 at 3095.446 kb on + strand, within PP_2703 at 3095.447 kb on - strand, within PP_2703 at 3095.731 kb on + strand at 3095.761 kb on + strand at 3095.761 kb on + strand at 3095.762 kb on - strand at 3095.767 kb on + strand at 3095.875 kb on + strand at 3095.876 kb on - strand at 3095.876 kb on - strand at 3095.915 kb on + strand, within PP_2704 at 3096.134 kb on - strand, within PP_2704 at 3096.166 kb on - strand, within PP_2704 at 3096.263 kb on - strand, within PP_2704 at 3096.263 kb on - strand, within PP_2704 at 3096.263 kb on - strand, within PP_2704 at 3096.464 kb on + strand, within PP_2704 at 3096.465 kb on - strand, within PP_2704 at 3096.465 kb on - strand, within PP_2704 at 3096.507 kb on - strand, within PP_2704 at 3096.623 kb on + strand, within PP_2704
Per-strain Table
Position Strand Gene LocusTag Fraction Hippuric (N) remove 3,093,530 - PP_2702 0.51 -0.0 3,093,562 + PP_2702 0.54 -2.1 3,093,598 + PP_2702 0.57 +0.5 3,093,598 + PP_2702 0.57 -0.1 3,093,598 + PP_2702 0.57 -0.2 3,093,616 + PP_2702 0.58 -0.6 3,093,616 + PP_2702 0.58 -0.2 3,093,616 + PP_2702 0.58 -1.4 3,093,616 + PP_2702 0.58 -1.4 3,093,616 + PP_2702 0.58 +1.3 3,093,617 - PP_2702 0.59 -1.3 3,093,662 - PP_2702 0.63 +1.5 3,093,662 - PP_2702 0.63 +0.9 3,093,833 - PP_2702 0.78 -0.4 3,093,904 + PP_2702 0.84 +0.5 3,093,905 - PP_2702 0.84 -0.0 3,093,905 - PP_2702 0.84 +0.1 3,093,931 + PP_2702 0.86 -0.3 3,093,971 - PP_2702 0.90 -0.3 3,093,971 - PP_2702 0.90 -3.7 3,094,070 + -1.9 3,094,071 - +0.3 3,094,158 + -1.1 3,094,158 + -2.0 3,094,381 - -1.9 3,094,399 + -1.2 3,094,422 - -1.5 3,094,576 + -1.9 3,094,577 - -0.4 3,094,591 + PP_2703 0.10 -3.2 3,094,607 + PP_2703 0.11 -2.9 3,094,607 + PP_2703 0.11 -1.9 3,094,910 + PP_2703 0.35 -2.2 3,094,911 - PP_2703 0.35 -0.1 3,094,981 + PP_2703 0.40 -2.0 3,095,107 + PP_2703 0.50 -1.0 3,095,108 - PP_2703 0.50 -1.2 3,095,111 + PP_2703 0.50 -0.3 3,095,111 + PP_2703 0.50 -1.9 3,095,111 + PP_2703 0.50 -0.9 3,095,111 + PP_2703 0.50 -2.8 3,095,111 + PP_2703 0.50 -1.5 3,095,111 + PP_2703 0.50 -2.3 3,095,111 + PP_2703 0.50 -0.6 3,095,112 - PP_2703 0.50 -0.8 3,095,155 - PP_2703 0.53 -0.9 3,095,240 - PP_2703 0.60 -1.7 3,095,254 + PP_2703 0.61 -2.3 3,095,266 + PP_2703 0.62 -2.7 3,095,267 - PP_2703 0.62 -1.6 3,095,267 - PP_2703 0.62 -2.6 3,095,287 + PP_2703 0.64 -1.9 3,095,326 - PP_2703 0.67 -2.3 3,095,378 - PP_2703 0.71 -1.5 3,095,378 - PP_2703 0.71 -2.3 3,095,378 - PP_2703 0.71 -3.1 3,095,446 + PP_2703 0.76 -2.0 3,095,446 + PP_2703 0.76 -1.5 3,095,447 - PP_2703 0.76 -3.2 3,095,731 + -2.2 3,095,761 + -1.7 3,095,761 + -2.3 3,095,762 - -1.3 3,095,767 + -0.9 3,095,875 + -2.8 3,095,876 - -2.0 3,095,876 - -4.4 3,095,915 + PP_2704 0.13 -2.3 3,096,134 - PP_2704 0.31 -2.0 3,096,166 - PP_2704 0.34 -2.3 3,096,263 - PP_2704 0.42 -4.8 3,096,263 - PP_2704 0.42 -1.5 3,096,263 - PP_2704 0.42 -3.2 3,096,464 + PP_2704 0.59 -3.3 3,096,465 - PP_2704 0.59 -3.9 3,096,465 - PP_2704 0.59 -1.1 3,096,507 - PP_2704 0.63 -1.1 3,096,623 + PP_2704 0.73 -2.0
Or see this region's nucleotide sequence