Strain Fitness in Pseudomonas putida KT2440 around PP_5654

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
4,620,056	+				+0.7
4,620,057	-				-1.1
4,620,082	+				-1.2
4,620,083	-				+0.0
4,620,124	+				+1.6
4,620,180	+				+0.5
4,620,395	-				-0.3
4,620,395	-				+1.4
4,620,424	-				+0.4
4,620,429	-				+1.0
4,620,595	+				+0.1
4,620,617	+				-2.0
4,620,617	+				+0.7
4,620,654	-				+0.1
4,620,674	-				+0.0
4,620,674	-				-0.8
4,620,679	-				+0.1
4,621,238	-		PP_5654	0.59	+0.8
4,621,328	-		PP_5654	0.81	+0.1
4,621,512	-				+0.5
4,621,565	+				+0.2
4,621,606	+				+0.2
4,621,647	+				-0.1
4,621,648	-				+0.3
4,621,703	+				+0.8
4,621,703	+				-0.9
4,621,704	-				-0.6
4,621,705	+				+0.1
4,621,725	+				-0.6
4,621,726	-				+0.3
4,621,726	-				-0.0
4,621,733	+				-0.2
4,621,733	+				-0.4
4,621,739	-				+0.1
4,621,796	-				+1.4
4,622,107	+				-0.1