Strain Fitness in Pseudomonas putida KT2440 around PP_4369

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
4,958,094	-		PP_4368	0.41	-1.1
4,958,094	-		PP_4368	0.41	+1.9
4,958,275	+		PP_4368	0.58	+1.2
4,958,275	+		PP_4368	0.58	-0.1
4,958,311	+		PP_4368	0.62	+0.7
4,958,372	+		PP_4368	0.68	+1.2
4,958,452	+		PP_4368	0.76	+2.9
4,958,452	+		PP_4368	0.76	+1.0
4,958,452	+		PP_4368	0.76	+0.4
4,958,453	-		PP_4368	0.76	+1.9
4,958,453	-		PP_4368	0.76	+0.7
4,958,453	-		PP_4368	0.76	+1.3
4,958,453	-		PP_4368	0.76	+2.5
4,958,690	+				+1.3
4,958,786	+				+1.3
4,959,026	+		PP_4369	0.19	+0.8
4,959,333	-		PP_4369	0.36	+1.8
4,959,635	+		PP_4369	0.53	+0.9
4,959,635	+		PP_4369	0.53	+2.1
4,959,636	-		PP_4369	0.53	+0.4
4,959,636	-		PP_4369	0.53	+0.9
4,959,636	-		PP_4369	0.53	+1.2
4,959,710	+		PP_4369	0.57	+1.6
4,959,710	+		PP_4369	0.57	+0.5
4,959,882	-		PP_4369	0.67	+0.9
4,959,996	+		PP_4369	0.73	+1.2
4,960,197	+		PP_4369	0.85	+0.8
4,960,199	+		PP_4369	0.85	+2.0
4,960,200	-		PP_4369	0.85	+0.3
4,960,200	-		PP_4369	0.85	+0.8
4,960,200	-		PP_4369	0.85	+1.8
4,960,200	-		PP_4369	0.85	+1.8
4,960,200	-		PP_4369	0.85	+1.5
4,960,200	-		PP_4369	0.85	+0.7
4,960,265	+		PP_4369	0.88	+0.8
4,960,475	+				+1.4
4,960,475	+				-0.2
4,960,476	-				+1.1
4,960,476	-				+0.1
4,960,514	+				+1.6
4,960,515	-				+2.0
4,960,538	-		PP_4370	0.16	+0.0
4,960,538	-		PP_4370	0.16	+1.5
4,960,738	+		PP_4370	0.76	+1.3
4,960,739	-		PP_4370	0.76	-0.1
4,960,739	-		PP_4370	0.76	+0.6
4,960,739	-		PP_4370	0.76	+1.3
4,960,739	-		PP_4370	0.76	+1.6
4,960,877	+				+1.8
4,961,422	+		PP_4371	0.25	-0.0
4,961,422	+		PP_4371	0.25	+0.3
4,961,422	+		PP_4371	0.25	-0.1
4,961,422	+		PP_4371	0.25	+0.7
4,961,423	-		PP_4371	0.25	+0.3
4,961,423	-		PP_4371	0.25	-0.6
4,961,423	-		PP_4371	0.25	+1.2
4,961,423	-		PP_4371	0.25	+0.5
4,961,423	-		PP_4371	0.25	+0.1
4,961,423	-		PP_4371	0.25	-0.0