Strain Fitness in Pseudomonas putida KT2440 around PP_4247

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
4,833,256	-				+0.2
4,833,396	+		PP_4246	0.18	+1.4
4,833,396	+		PP_4246	0.18	+0.4
4,833,397	-		PP_4246	0.18	+1.3
4,833,397	-		PP_4246	0.18	+0.9
4,833,471	+		PP_4246	0.27	-0.5
4,833,472	-		PP_4246	0.27	+0.4
4,833,493	+		PP_4246	0.30	-0.1
4,833,541	-		PP_4246	0.36	+0.2
4,833,558	+		PP_4246	0.38	-0.5
4,833,558	+		PP_4246	0.38	+0.2
4,833,558	+		PP_4246	0.38	-0.3
4,833,559	-		PP_4246	0.38	+0.8
4,833,559	-		PP_4246	0.38	+0.4
4,833,559	-				+3.0
4,833,559	-		PP_4246	0.38	-0.2
4,833,559	-		PP_4246	0.38	+0.0
4,833,559	-		PP_4246	0.38	-1.5
4,833,559	-		PP_4246	0.38	-0.0
4,833,559	-		PP_4246	0.38	-1.0
4,833,573	+		PP_4246	0.40	+0.2
4,833,613	-		PP_4246	0.45	+0.4
4,833,821	-		PP_4246	0.71	-0.1
4,833,826	+		PP_4246	0.71	-0.0
4,833,826	+		PP_4246	0.71	-0.5
4,833,826	+		PP_4246	0.71	-0.5
4,833,827	-		PP_4246	0.72	+1.0
4,833,846	+		PP_4246	0.74	-0.2
4,833,847	-		PP_4246	0.74	+0.1
4,833,847	-		PP_4246	0.74	-1.5
4,833,847	-		PP_4246	0.74	+0.4
4,833,927	+		PP_4246	0.84	-0.0
4,833,927	+		PP_4246	0.84	+0.4
4,834,075	+				+0.7
4,834,075	+				+0.5
4,834,084	-				-0.8
4,834,091	+				-0.1
4,834,092	-				+0.6
4,834,092	-				+0.0
4,834,097	-				+0.0
4,834,123	-				-0.3
4,834,123	-				-0.2
4,834,166	+				-0.1
4,834,166	+				-0.8
4,834,166	+				+1.6
4,834,194	-				+0.2
4,834,201	-				+0.3
4,834,285	+		PP_4247	0.11	+1.0
4,834,568	+		PP_4247	0.62	-0.4
4,834,743	+				+0.4
4,834,746	+				-1.1
4,834,746	+				-2.2
4,834,747	-				+0.5
4,834,810	-				+0.6
4,834,810	-				-1.4
4,835,113	+				-0.7
4,835,114	-				-0.5
4,835,114	-				-0.4
4,835,114	-				-0.7
4,835,114	-				+0.1
4,835,114	-				-0.1
4,835,114	-				+0.3
4,835,114	-				-0.2
4,835,134	+				+0.0
4,835,135	-				-0.8
4,835,135	-				-0.0
4,835,178	+				-0.6
4,835,179	-				+0.2
4,835,219	+				-0.2
4,835,219	+				-0.0
4,835,219	+				-1.8
4,835,219	+				+0.4
4,835,219	+				+0.5
4,835,219	+				-0.4
4,835,252	+				-1.4
4,835,252	+				+1.1
4,835,253	-				+0.2
4,835,357	-		PP_4249	0.15	-0.2
4,835,477	-		PP_4249	0.33	+0.2
4,835,477	-		PP_4249	0.33	-0.9
4,835,516	+		PP_4249	0.38	-1.2
4,835,717	+		PP_4249	0.67	+0.4
4,835,718	-		PP_4249	0.67	+0.1