Strain Fitness in Pseudomonas putida KT2440 around PP_1270

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
1,449,868	-		PP_1268	0.49	-3.0
1,450,008	+		PP_1268	0.85	-0.9
1,450,008	+		PP_1268	0.85	-2.1
1,450,008	+		PP_1268	0.85	-1.4
1,450,009	-		PP_1268	0.85	-0.7
1,450,009	-		PP_1268	0.85	-1.8
1,450,032	-				+0.7
1,450,032	-				+0.0
1,450,079	+				+0.5
1,450,080	-				+0.3
1,450,080	-				-0.5
1,450,366	-		PP_1269	0.60	+0.3
1,450,702	+				+0.5
1,450,703	-				+0.9
1,450,703	-				+0.8
1,450,712	+				+0.1
1,450,725	+				-0.1
1,450,725	+				+1.4
1,450,726	-				+0.6
1,450,726	-				-0.9
1,450,779	+				+0.0
1,450,779	+				+0.2
1,450,780	-				-0.5
1,450,996	+		PP_1270	0.20	-0.2
1,450,996	+		PP_1270	0.20	-0.4
1,450,997	-		PP_1270	0.20	-0.4
1,451,314	+		PP_1270	0.55	-0.7
1,451,315	-		PP_1270	0.55	-0.3
1,451,319	-		PP_1270	0.55	-0.8
1,451,319	-		PP_1270	0.55	-0.1
1,451,351	-		PP_1270	0.59	-0.7
1,451,351	-		PP_1270	0.59	-0.7
1,451,555	-		PP_1270	0.81	-1.0
1,451,555	-		PP_1270	0.81	-1.4
1,451,555	-		PP_1270	0.81	-1.5
1,451,631	+		PP_1270	0.90	-2.0
1,451,631	+		PP_1270	0.90	-0.9
1,451,631	+		PP_1270	0.90	-2.4
1,451,631	+		PP_1270	0.90	-2.1
1,451,632	-				-0.1
1,451,795	+				-1.7
1,451,832	+				-0.5
1,451,832	+				-0.7
1,451,832	+				-1.1
1,452,061	+		PP_1271	0.14	-2.1
1,452,061	+		PP_1271	0.14	-2.2
1,452,061	+		PP_1271	0.14	-1.7
1,452,062	-		PP_1271	0.14	-1.5
1,452,302	-				+1.1
1,452,379	+		PP_1271	0.35	-0.3
1,452,640	+		PP_1271	0.52	-1.0