Strain Fitness in Pseudomonas putida KT2440 around PP_0690
Experiment: R2A with Fusaric 480 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Fusaric 480 ug/mL |
---|---|---|---|---|---|
remove | |||||
801,427 | + | -0.1 | |||
802,728 | + | -2.0 | |||
802,728 | + | -1.7 | |||
802,728 | + | -1.0 | |||
802,753 | + | +0.0 | |||
802,788 | + | -0.4 | |||
802,798 | - | -1.8 | |||
802,801 | + | -0.9 | |||
802,801 | + | -0.2 | |||
802,802 | - | -3.1 | |||
802,802 | - | -2.5 | |||
802,814 | + | -2.7 | |||
802,814 | + | -1.2 | |||
802,866 | + | -2.5 | |||
802,976 | + | PP_0691 | 0.13 | -1.7 | |
803,358 | + | PP_0691 | 0.47 | -1.5 | |
803,359 | - | PP_0691 | 0.47 | -3.5 | |
803,359 | - | PP_0691 | 0.47 | -1.9 | |
803,359 | - | PP_0691 | 0.47 | -2.6 | |
803,359 | - | -0.6 | |||
803,405 | - | PP_0691 | 0.52 | -1.4 |
Or see this region's nucleotide sequence