Strain Fitness in Pseudomonas putida KT2440 around PP_0807

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
944,872	-				+0.9
945,279	+				+0.3
945,353	+				-0.0
945,354	-				+0.9
945,396	+				+0.1
945,396	+				+0.7
945,397	-				+0.5
945,550	+				+0.9
945,558	+				+1.1
945,558	+				+0.5
945,680	+				-0.1
945,680	+				+0.3
945,680	+				+0.7
945,703	+				-0.5
945,703	+				+0.8
945,703	+				+1.0
945,703	+				+1.2
945,703	+				-0.0
945,703	+				+1.0
945,703	+				+0.4
945,704	-				-0.4
945,704	-				+0.3
945,704	-				-1.0
945,750	+				+0.8
945,750	+				+0.7
945,750	+				+0.2
945,750	+				+0.2
945,750	+				+1.0
945,750	+				+0.9
945,750	+				+1.0
945,751	-				-0.6
945,751	-				-0.9
945,751	-				+0.5
945,751	-				-1.0
945,752	+				+0.5
945,752	+				+1.4
945,752	+				+1.4
945,752	+				+0.3
945,752	+				+0.7
945,752	+				+0.3
945,752	+				+0.5
945,752	+				-0.5
945,752	+				+1.1
945,752	+				-0.2
945,752	+				+1.1
945,752	+				+0.9
945,752	+				+1.9
945,753	-				+1.2
945,753	-				-1.3
945,753	-				+1.2
945,753	-				+0.6
945,753	-				+0.9
945,753	-				-0.2
945,753	-				-0.5
945,791	+				+0.2
945,803	-				+1.0
945,936	+				-0.8
945,936	+				-1.0
945,937	-				+0.1
945,937	-				+1.8
945,940	+				+0.5
945,940	+				+0.2
945,940	+				+1.4
945,941	-				+0.9
945,941	-				-1.0
946,069	+		PP_0807	0.17	+0.2
946,070	-		PP_0807	0.17	-0.4
946,070	-		PP_0807	0.17	-0.2
946,070	-		PP_0807	0.17	-0.6
946,239	+		PP_0807	0.27	-1.3
946,240	-		PP_0807	0.27	-0.2
946,240	-		PP_0807	0.27	+0.3
946,251	-		PP_0807	0.28	-0.7
946,318	-		PP_0807	0.32	+0.5
946,318	-		PP_0807	0.32	-0.4
946,452	-		PP_0807	0.41	+0.4
946,452	-		PP_0807	0.41	-1.0
946,874	-		PP_0807	0.68	-0.1
947,129	+		PP_0807	0.85	+0.5
947,129	+		PP_0807	0.85	+0.7
947,185	+		PP_0807	0.88	+0.1
947,290	-				+0.3
947,564	+				+0.9
947,565	-				-0.1
947,565	-				-0.7
947,565	-				-0.7
947,609	-				+0.3
947,609	-				-0.9
947,630	-				-1.2
947,713	+		PP_0808	0.16	+0.6
947,713	+		PP_0808	0.16	-0.7
947,714	-		PP_0808	0.16	-1.3
947,948	-		PP_0808	0.36	-0.7
947,949	+		PP_0808	0.36	-0.0
947,950	-		PP_0808	0.36	+0.3
947,950	-		PP_0808	0.36	+0.1
947,950	-		PP_0808	0.36	-0.4
948,094	+		PP_0808	0.48	+0.3
948,094	+		PP_0808	0.48	-0.9
948,095	-		PP_0808	0.48	+1.2
948,095	-		PP_0808	0.48	-0.5
948,095	-		PP_0808	0.48	+1.0
948,142	+		PP_0808	0.52	+0.4
948,142	+		PP_0808	0.52	-0.7
948,142	+		PP_0808	0.52	-2.1
948,143	-		PP_0808	0.53	-0.5
948,143	-		PP_0808	0.53	+0.7
948,220	+		PP_0808	0.59	+0.1
948,221	-		PP_0808	0.59	+0.3
948,221	-		PP_0808	0.59	+0.1
948,249	+		PP_0808	0.61	+0.3