Strain Fitness in Pseudomonas putida KT2440 around PP_2747

Experiment: R2A with Fusaric 480 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusaric 480 ug/mL
3,129,231	+		PP_2746	0.34	-2.1
3,129,244	-		PP_2746	0.35	-0.8
3,129,258	+		PP_2746	0.36	-1.2
3,129,259	-		PP_2746	0.36	+0.9
3,129,426	+		PP_2746	0.48	+0.2
3,129,427	-		PP_2746	0.48	-1.1
3,129,658	-		PP_2746	0.64	+0.5
3,129,658	-		PP_2746	0.64	-0.7
3,129,659	+		PP_2746	0.64	-0.1
3,129,659	+		PP_2746	0.64	+0.5
3,129,660	-		PP_2746	0.64	+1.1
3,129,660	-				-0.9
3,129,666	+		PP_2746	0.65	+0.3
3,129,746	+		PP_2746	0.70	+0.2
3,129,752	+		PP_2746	0.71	+0.7
3,129,753	-		PP_2746	0.71	-0.2
3,129,842	+		PP_2746	0.77	+0.2
3,129,842	+		PP_2746	0.77	+1.3
3,130,018	-		PP_2746	0.90	+0.6
3,130,191	+				-0.5
3,130,191	+				+0.1
3,130,192	-				-0.8
3,130,192	-				-0.2
3,130,192	-				+0.5
3,130,192	-				-0.7
3,130,221	+				+0.1
3,130,570	-		PP_2747	0.40	+0.6
3,130,807	-				+2.1
3,130,825	-		PP_2747	0.66	+0.6
3,131,080	+				-1.9
3,131,081	-				-0.2
3,131,081	-				-1.6
3,131,081	-				-0.0
3,131,081	-				-1.7
3,131,101	-				+1.6
3,131,135	+				+0.9
3,131,312	-		PP_2748	0.24	-0.1
3,131,615	-		PP_2748	0.62	+1.5
3,131,841	+		PP_2748	0.90	-0.8
3,131,841	+		PP_2748	0.90	-0.4
3,132,003	+				+0.8
3,132,003	+				-0.8
3,132,122	-		PP_2749	0.23	-0.5